KCL TEST: an open-source inspired asymptomatic SARS-CoV-2 surveillance programme in an academic institution

Author:

Reis de Andrade Joana1,Scourfield Edward1,Peswani-Sajnani Shilpa Lekhraj1,Poulton Kate2,ap Rees Thomas1,Khooshemehri Paniz2,Doherty George12,Ong Stephanie12,Ivan Iustina-Francisca12,Goudarzi Negin12,Gardiner Isaac1,Caine Estelle1,Maguire Thomas J A12ORCID,Leightley Daniel3,Torrico Luis4,Gasulla Alex5,Menendez-Vazquez Angel6,Ortega-Prieto Ana Maria2ORCID,Pickering Suzanne2,Jimenez-Guardeño Jose M2ORCID,Batra Rahul7,Rubinchik Sona1,Tan Aaron V F1,Griffin Amy1,Sherrin David1,Papaioannou Stelios2,Trouillet Celine2,Mischo Hannah E2,Giralt Victoriano8,Wilson Samantha1,Kirk Martin1,Neil Stuart J D2,Galao Rui Pedro2,Martindale Jo1,Curtis Charles1,Zuckerman Mark9,Razavi Reza10ORCID,Malim Michael H2,Martinez-Nunez Rocio T2ORCID

Affiliation:

1. Research Management and Innovation Directorate, KCL TEST, King’s College London , London, UK

2. Department of Infectious Diseases, King’s College London , London, UK

3. Department of Population Health Sciences, School of Life Course & Population Sciences, Faculty of Life Sciences & Medicine, King’s College London , London, UK

4. Torrysoft , Madrid, Spain

5. Innovartium , Barcelona, Spain

6. Peter Gorer Department of Immunobiology, King’s College London , London, UK

7. Guy’s and St Thomas’ NHS Foundation Trust , London, UK

8. Area de Sistemas, Servicio Central de Informática, University of Malaga , Malaga, Spain

9. South London Specialist Virology Centre, King’s College Hospital , London, UK

10. School of Biomedical Engineering and Imaging Sciences, King’s College London , London, UK

Abstract

Abstract Rapid and accessible testing was paramount in the management of the COVID-19 pandemic. Our university established KCL TEST: a SARS-CoV-2 asymptomatic testing programme that enabled sensitive and accessible PCR testing of SARS-CoV-2 RNA in saliva. Here, we describe our learnings and provide our blueprint for launching diagnostic laboratories, particularly in low-resource settings. Between December 2020 and July 2022, we performed 158277 PCRs for our staff, students, and their household contacts, free of charge. Our average turnaround time was 16 h and 37 min from user registration to result delivery. KCL TEST combined open-source automation and in-house non-commercial reagents, which allows for rapid implementation and repurposing. Importantly, our data parallel those of the UK Office for National Statistics, though we detected a lower positive rate and virtually no delta wave. Our observations strongly support regular asymptomatic community testing as an important measure for decreasing outbreaks and providing safe working spaces. Universities can therefore provide agile, resilient, and accurate testing that reflects the infection rate and trend of the general population. Our findings call for the early integration of academic institutions in pandemic preparedness, with capabilities to rapidly deploy highly skilled staff, as well as develop, test, and accommodate efficient low-cost pipelines.

Funder

Huo Family Foundation

Publisher

Oxford University Press (OUP)

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