Pushing the limits of de novo genome assembly for complex prokaryotic genomes harboring very long, near identical repeats-Reference-Cited by-同舟云学术

Pushing the limits of de novo genome assembly for complex prokaryotic genomes harboring very long, near identical repeats

Author:

Schmid Michael¹²,Frei Daniel¹,Patrignani Andrea³,Schlapbach Ralph³,Frey Jürg E¹,Remus-Emsermann Mitja N P⁴⁵,Ahrens Christian H¹²^ORCID

Affiliation:

1. Agroscope, Molecular Diagnostics, Genomics & Bioinformatics, Wädenswil CH-8820, Switzerland

2. SIB Swiss Institute of Bioinformatics, Wädenswil CH-8820, Switzerland

3. Functional Genomics Center Zurich, University of Zurich & ETH Zurich, Zurich CH-8057, Switzerland

4. School of Biological Sciences, University of Canterbury, Christchurch 8140, New Zealand

5. Biomolecular Interaction Centre, University of Canterbury, Christchurch, 8140, New Zealand

Funder

Swiss National Science Foundation

Publisher

Oxford University Press (OUP)

Subject

Genetics

Link

Reference61 articles.

4. Completing bacterial genome assemblies with multiplex MinION sequencing;Wick;Microb. Genom.,2017

5. Optimal DNA shotgun sequencing: Noisy reads are as good as noiseless reads;Motahari,2013

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