The use of R in forestry research

Author:

Lai Jiangshan12,Zhu Weijie12,Cui Dongfang12,Fan Dayong3,Mao Lingfeng12

Affiliation:

1. College of Ecology and Environment, Nanjing Forestry University , Nanjing 210037 , China

2. Research Center of Quantitative Ecology, Nanjing Forestry University , Nanjing 210037 , China

3. College of Forestry, Beijing Forestry University , Beijing 100083 , China

Abstract

Abstract The field of forestry research has greatly benefited from the integration of computational tools and statistical methods in recent years. Among these tools, the programming language R has emerged as a powerful and versatile platform for forestry research, ranging from data analysis, modeling to visualization. However, the key trends in general reported R use and patterns in forestry research remain unknown. We analyzed R and R package usage frequencies for 14 800 research articles published in eight top forestry journals across a span of 10 years, from 2013 to 2022. Among these articles, a notable number of 6790 (accounting for 45.7%) explicitly utilized R as their primary tool for data analysis. The adoption of R exhibited a linear growth trend, rising from 28.3% in 2013 to 60.9% in 2022. The top five used packages reported were vegan, lme4, nlme, MuMIn, and ggplot2. Diverse journals have their unique areas of emphasis, resulting in disparities in the frequency of R package application among journals. The average number of R packages used per article also showed an increasing trend over time. The study underscores the recognition that R, with its powerful data statistical and visualization capabilities, plays a pivotal role in enabling researchers to conduct thorough analyses and acquire comprehensive insights into various aspects of forestry science.

Funder

National Natural Science Foundation of China

Nanjing Forestry University

Publisher

Oxford University Press (OUP)

Subject

Plant Science,Ecology,Ecology, Evolution, Behavior and Systematics

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