Novel loss-of-function variants expand ABCC9-related intellectual disability and myopathy syndrome

Author:

Efthymiou Stephanie1ORCID,Scala Marcello123ORCID,Nagaraj Vini4,Ochenkowska Katarzyna5,Komdeur Fenne L6,Liang Robin A7,Abdel-Hamid Mohamed S8,Sultan Tipu9,Barøy Tuva10,Van Ghelue Marijke7,Vona Barbara11ORCID,Maroofian Reza1ORCID,Zafar Faisal12,Alkuraya Fowzan S13ORCID,Zaki Maha S14,Severino Mariasavina15ORCID,Duru Kingsley C4,Tryon Robert C16,Brauteset Lin Vigdis17,Ansari Morad18,Hamilton Mark19,van Haelst Mieke M6,van Haaften Gijs20,Zara Federico3,Houlden Henry1ORCID,Samarut Éric5ORCID,Nichols Colin G16,Smeland Marie F2122,McClenaghan Conor4

Affiliation:

1. Department of Neuromuscular Disorders, UCL Queen Square Institute of Neurology, University College London , London WC1N 3BG , UK

2. Department of Neurosciences, Rehabilitation, Ophthalmology, Genetics, Maternal and Child Health, University of Genoa , 16147 Genoa , Italy

3. U.O.C. Genetica Medica, IRCCS Istituto Giannina Gaslini , 16147 Genoa , Italy

4. Center for Advanced Biotechnology and Medicine, and Departments of Pharmacology and Medicine, Robert Wood Johnson Medical School, Rutgers the State University of New Jersey , Piscatway, NJ 08854 , USA

5. Centre de Recherche du Centre Hospitalier de l’Université de Montréal (CRCHUM), and Department of Neuroscience, Université de Montréal , Montreal H2X 0A9, Quebec , Canada

6. Section Clinical Genetics, Department of Human Genetics and Amsterdam Reproduction and Development, Amsterdam University Medical Centers , 1105 AZ, Amsterdam , The Netherlands

7. Department of Medical Genetics, Division of Child and Adolescent Health, University Hospital of North Norway , 9019 Tromsø , Norway

8. Medical Molecular Genetics Department, Human Genetics and Genome Research Institute, National Research Centre , Cairo 12622 , Egypt

9. Department of Pediatric Neurology, Children Hospital, University of Child Health Sciences , Lahore, Punjab 54000 , Pakistan

10. Department of Medical Genetics, Oslo University Hospital , 0450 Oslo , Norway

11. Institute of Human Genetics and Institute for Auditory Neuroscience and InnerEarLab, University Medical Center Göttingen , 37073 Göttingen , Germany

12. Department of Paediatric Neurology, Children’s Hospital and Institute of Child Health , Multan, Punjab 60000 , Pakistan

13. Department of Translational Genomics, Center for Genomic Medicine, King Faisal Specialist Hospital and Research Center , Riyadh 12713 , Saudi Arabia

14. Clinical Genetics Department, Human Genetics and Genome Research Institute, National Research Centre , Cairo 12622 , Egypt

15. Neuroradiology Unit, IRCCS Istituto Giannina Gaslini , 16147 Genova , Italy

16. Department of Cell Biology and Physiology, and Center for the Investigation of Membrane Excitability Diseases (CIMED), Washington University , St Louis, MO 63110 , USA

17. Division of Habilitation for Children, Innlandet Hospital Sanderud , Hamar 2312 , Norway

18. South East Scotland Genetic Service, Western General Hospital , Edinburgh EH4 2XU , UK

19. West of Scotland Clinical Genetics Service, Queen Elizabeth University Hospital , Glasgow G51 4TF , UK

20. Department of Genetics, University Medical Center, Utrecht , 3584 CX , The Netherlands

21. Department of Pediatric Rehabilitation, University Hospital of North Norway , 9019 Tromsø , Norway

22. Institute of Clinical Medicine, UiT The Arctic University of Norway , 9019, Tromsø , Norway

Abstract

Abstract Loss-of-function mutation of ABCC9, the gene encoding the SUR2 subunit of ATP sensitive-potassium (KATP) channels, was recently associated with autosomal recessive ABCC9-related intellectual disability and myopathy syndrome (AIMS). Here we identify nine additional subjects, from seven unrelated families, harbouring different homozygous loss-of-function variants in ABCC9 and presenting with a conserved range of clinical features. All variants are predicted to result in severe truncations or in-frame deletions within SUR2, leading to the generation of non-functional SUR2-dependent KATP channels. Affected individuals show psychomotor delay and intellectual disability of variable severity, microcephaly, corpus callosum and white matter abnormalities, seizures, spasticity, short stature, muscle fatigability and weakness. Heterozygous parents do not show any conserved clinical pathology but report multiple incidences of intra-uterine fetal death, which were also observed in an eighth family included in this study. In vivo studies of abcc9 loss-of-function in zebrafish revealed an exacerbated motor response to pentylenetetrazole, a pro-convulsive drug, consistent with impaired neurodevelopment associated with an increased seizure susceptibility. Our findings define an ABCC9 loss-of-function-related phenotype, expanding the genotypic and phenotypic spectrum of AIMS and reveal novel human pathologies arising from KATP channel dysfunction.

Funder

Wellcome Trust

International Centre for Genomic Medicine in Neuromuscular Diseases

The MRC

The MSA Trust

The National Institute for Health Research University College London Hospitals Biomedical Research Centre

The Michael J Fox Foundation

BBSRC

The Fidelity Trust

Rosetrees Trust

Ataxia UK

Brain Research UK

Sparks GOSH Charity

Alzheimer’s Research UK

CureDRPLA

German Research Foundation

NIH

Publisher

Oxford University Press (OUP)

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