Optimizing Exosome Preparation Based on Size and Morphology: Insights From Electron Microscopy

Author:

Ishii Noriyuki123ORCID,Noguchi Keiichi4,Ikemoto Mitsushi J56,Yohda Masafumi7,Odahara Takayuki8

Affiliation:

1. Cellular and Molecular Biotechnology Research Institute, Department of Life Science and Biotechnology, National Institute of Advanced Industrial Science and Technology (AIST) , Tsukuba Central-6, 1-1-1 Higashi, Tsukuba, Ibaraki 305-8566 , Japan

2. Electron Microscopy Facility, Open Research Facilities Station, Open Research Platform Unit, Tsukuba Innovation Arena (TIA) Central Office, National Institute of Advanced Industrial Science and Technology (AIST) , Tsukuba Central-6, 1-1-1 Higashi, Tsukuba, Ibaraki 305-8566 , Japan

3. The United Graduate School of Agricultural Science, Gifu University , 1-1 Yanagido, Gifu, Gifu 501-1193 , Japan

4. Instrumentation Analysis Center, Tokyo University of Agriculture and Technology , 2-24-16 Naka, Koganei, Tokyo 184-8588 , Japan

5. Health and Medical Research Institute, Department of Life Science and Biotechnology, National Institute of Advanced Industrial Science and Technology (AIST) , Tsukuba Central-6, 1-1-1 Higashi, Tsukuba, Ibaraki 305-8566 , Japan

6. Graduate School of Science, Toho University , 2-2-1 Miyama, Funabashi, Chiba 274-8510 , Japan

7. Department of Biotechnology and Life Science, Tokyo University of Agriculture and Technology , 2-24-16 Naka, Koganei, Tokyo 184-8588 , Japan

8. Biomedical Research Institute, Department of Life Science and Biotechnology, National Institute of Advanced Industrial Science and Technology (AIST) , Tsukuba Central-6, 1-1-1 Higashi, Tsukuba, Ibaraki 305-8566 , Japan

Abstract

Abstract Extracellular vesicles (EVs), including exosomes, are crucial in intercellular communication, but differentiating between exosomes and microvesicles is challenging due to their similar morphology and size. This study focuses on multivesicular bodies (MVBs), where exosomes mature, and optimizes exosome isolation using transmission electron microscopy (TEM) for size information. Considering that EVs are nanocolloidal particles, a salt-free Bis-Tris buffer is found to maintain EV integrity better than phosphate-buffered saline (PBS). Dynamic light scattering (DLS) and TEM analysis confirm that intact exosome fractions under the salt-free Bis-Tris buffer condition exhibit polydispersity, including a unique population of <50 nm vesicles resembling intraluminal membrane vesicles (ILVs) in MVBs, alongside larger populations. This <50 nm population disappears in PBS or Bis-Tris buffer with 140 mM NaCl, transforming into a monodisperse population >100 nm. Immunoelectron microscopy also validates the presence of CD63, an exosome biomarker, on approximately 50 nm EVs. These findings provide valuable insights into exosome characterization and isolation, essential for future biomedical applications in diagnostics and drug delivery.

Funder

Japan Society for the Promotion of Science

National Institute of Advanced Industrial Science and Technology

Publisher

Oxford University Press (OUP)

Subject

Instrumentation

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