E. coligene regulatory networks are inconsistent with gene expression data-Reference-Cited by-同舟云学术

E. coligene regulatory networks are inconsistent with gene expression data

Published:2018-11-20 Issue:1 Volume:47 Page:85-92
ISSN:0305-1048
Container-title:Nucleic Acids Research
language:en
Short-container-title:

Author:

Larsen Simon J¹^ORCID,Röttger Richard¹,Schmidt Harald H H W²,Baumbach Jan¹³

Affiliation:

1. Department of Mathematics and Computer Science, University of Southern Denmark, Campusvej 55, 5230 Odense, Denmark

2. Department of Pharmacology and Personalised Medicine, MaCSBio, Maastricht University, Universiteitssingel 60, 6229 ER, Maastricht, The Netherlands

3. Chair of Experimental Bioinformatics, Wissenschaftszentrum Weihenstephan, Technical University of Munich, Maximus-von-Imhof-Forum 3, 85354 Freising-Weihenstephan, Germany

Funder

Villum Foundation

European Research Council

European Cooperation in Science & Technology

European Union Horizon 2020 Research and Innovation Programme

Publisher

Oxford University Press (OUP)

Subject

Genetics

Link

http://academic.oup.com/nar/article-pdf/47/1/85/27457357/gky1176.pdf

Reference34 articles.

1. Advantages and limitations of current network inference methods;De Smet;Nat. Rev. Microbiol.,2010

2. Gene regulatory network inference: evaluation and application to ovarian cancer allows the prioritization of drug targets;Madhamshettiwar;Genome Med.,2012

3. Wisdom of crowds for robust gene network inference;Marbach;Nat. Methods,2012

4. Computational discovery of gene modules and regulatory networks;Bar-Joseph;Nat. Biotechnol.,2003

5. Integrated biclustering of heterogeneous genome-wide datasets for the inference of global regulatory networks;Reiss;BMC Bioinformatics,2006

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