Flexibility and structure of flanking DNA impact transcription factor affinity for its core motif-Reference-Cited by-同舟云学术

Flexibility and structure of flanking DNA impact transcription factor affinity for its core motif

Published:2018-11-05 Issue:22 Volume:46 Page:11883-11897
ISSN:0305-1048
Container-title:Nucleic Acids Research
language:en
Short-container-title:

Author:

Yella Venkata Rajesh¹²,Bhimsaria Devesh³,Ghoshdastidar Debostuti¹,Rodríguez-Martínez José A³⁴,Ansari Aseem Z³⁵,Bansal Manju¹^ORCID

Affiliation:

1. Molecular Biophysics Unit, Indian Institute of Science, Bangalore 560012, India

2. Department of Biotechnology, Koneru Lakshmaiah Education Foundation, Vaddeswaram, Guntur, Andhra Pradesh 522502, India

3. Department of Biochemistry, University of Wisconsin-Madison, Madison, WI 53706, USA

4. Department of Biology, University of Puerto Rico-Rio Piedras, San Juan, PR 00925, USA

5. The Genome Center of Wisconsin, Madison, WI 53706, USA

Funder

National Institutes of Health

Department of Science and Technology, Government of India

Publisher

Oxford University Press (OUP)

Subject

Genetics

Link

http://academic.oup.com/nar/article-pdf/46/22/11883/27179289/gky1057.pdf

Reference73 articles.

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2. Small local variations in B-form DNA lead to a large variety of global geometries which can accommodate most DNA-binding protein motifs;Marathe;BMC Struct. Biol.,2009

3. The structural basis of DNA flexibility;Travers;Philos. Trans. R. Soc. Lond. A,2004

4. Structural variations observed in DNA crystal structures and their implications for protein-DNA interaction;Bansal;Biol. Struct. Dyn. Proc. Ninth Conversation,1996

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