OrthoInspector 3.0: open portal for comparative genomics-Reference-Cited by-同舟云学术

OrthoInspector 3.0: open portal for comparative genomics

Published:2018-10-31 Issue:D1 Volume:47 Page:D411-D418
ISSN:0305-1048
Container-title:Nucleic Acids Research
language:en
Short-container-title:

Author:

Nevers Yannis¹,Kress Arnaud¹,Defosset Audrey¹,Ripp Raymond¹,Linard Benjamin²³⁴,Thompson Julie D¹,Poch Olivier¹,Lecompte Odile¹

Affiliation:

1. Department of Computer Science, ICube, UMR 7357, University of Strasbourg, CNRS, Fédération de Médecine Translationnelle de Strasbourg, Strasbourg, France

2. LIRMM, Univ Montpellier, CNRS, Montpellier, France

3. ISEM, Univ Montpellier, CNRS, IRD, EPHE, CIRAD, INRAP, Montpellier, France

4. AGAP, Univ Montpellier, CIRAD, INRA, Montpellier Supagro, Montpellier, France

Funder

Agence Nationale de la Recherche

Publisher

Oxford University Press (OUP)

Subject

Genetics

Link

http://academic.oup.com/nar/article-pdf/47/D1/D411/27437551/gky1068.pdf

Reference26 articles.

1. Distinguishing homologous from analogous proteins;Fitch;Syst. Zool.,1970

2. A Genomic Perspective on Protein Families;Tatusov;Science,1997

3. Testing the Ortholog Conjecture with Comparative Functional Genomic Data from Mammals;Nehrt;PLOS Comput. Biol.,2011

4. Resolving the ortholog conjecture: orthologs tend to be weakly, but significantly, more similar in function than paralogs;Altenhoff;PLoS Comput. Biol.,2012

5. Orthologs, paralogs, and evolutionary genomics;Koonin;Annu. Rev. Genet.,2005

Cited by 49 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. SonicParanoid2: fast, accurate, and comprehensive orthology inference with machine learning and language models;Genome Biology;2024-07-25

2. Predicting DNA sequence splice site based on graph convolutional network and DNA graph construction;Journal of King Saud University - Computer and Information Sciences;2024-06

3. Updates to the Alliance of Genome Resources central infrastructure;GENETICS;2024-03-29

4. Informatic challenges and advances in illuminating the druggable proteome;Drug Discovery Today;2024-03

5. Orthology inference at scale with FastOMA;2024-01-31