Assembly of a parts list of the human mitotic cell cycle machinery

Author:

Giotti Bruno12ORCID,Chen Sz-Hau1,Barnett Mark W1,Regan Tim1,Ly Tony3,Wiemann Stefan4,Hume David A15,Freeman Tom C1

Affiliation:

1. The Roslin Institute, University of Edinburgh, Easter Bush, Midlothian, Scotland, UK

2. Biosciences and Biotechnology Institute, EDyP Department, CEA Grenoble, 17 rue des Martyrs, Grenoble, France

3. Wellcome Centre for Cell Biology, University of Edinburgh, Swann Building, Edinburgh EH9 3BF, Scotland, UK

4. Molecular Genome Analysis (B050), Deutsches Krebsforschungszentrum, Im Neuenheimer Feld 580, Heidelberg, Germany

5. Mater Research Institute, University of Queensland, Level 3, Aubigny Place, Raymond Terrace, South Brisbane, Qld,Australia

Abstract

Abstract The set of proteins required for mitotic division remains poorly characterized. Here, an extensive series of correlation analyses of human and mouse transcriptomics data were performed to identify genes strongly and reproducibly associated with cells undergoing S/G2-M phases of the cell cycle. In so doing, 701 cell cycle-associated genes were defined and while it was shown that many are only expressed during these phases, the expression of others is also driven by alternative promoters. Of this list, 496 genes have known cell cycle functions, whereas 205 were assigned as putative cell cycle genes, 53 of which are functionally uncharacterized. Among these, 27 were screened for subcellular localization revealing many to be nuclear localized and at least three to be novel centrosomal proteins. Furthermore, 10 others inhibited cell proliferation upon siRNA knockdown. This study presents the first comprehensive list of human cell cycle proteins, identifying many new candidate proteins.

Funder

Biotechnology and Biological Sciences Research Council

EastBio studentship

Wellcome Trust and the Royal Society

Cell Biology

Wellcome grant

M.W.B., D.A.H.

T.C.F.

Institute Strategic

Publisher

Oxford University Press (OUP)

Subject

Cell Biology,Genetics,Molecular Biology,General Medicine

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