Detecting tipping points of complex diseases by network information entropy

Author:

Lyu Chengshang123ORCID,Chen Lingxi3ORCID,Liu Xiaoping12ORCID

Affiliation:

1. Key Laboratory of Systems Health Science of Zhejiang Province , School of Life Science, Hangzhou Institute for Advanced Study, , 1 Xiangshan Branch Alley, Xihu District, Hangzhou 310024, China

2. University of Chinese Academy of Sciences , School of Life Science, Hangzhou Institute for Advanced Study, , 1 Xiangshan Branch Alley, Xihu District, Hangzhou 310024, China

3. Department of Biomedical Sciences, City University of Hong Kong, 31 To Yuen Street, Kowloon Tong, Kowloon , Hong Kong 999077, China

Abstract

Abstract The progression of complex diseases often involves abrupt and non-linear changes characterized by sudden shifts that trigger critical transformations. Identifying these critical states or tipping points is crucial for understanding disease progression and developing effective interventions. To address this challenge, we have developed a model-free method named Network Information Entropy of Edges (NIEE). Leveraging dynamic network biomarkers, sample-specific networks, and information entropy theories, NIEE can detect critical states or tipping points in diverse data types, including bulk, single-sample expression data. By applying NIEE to real disease datasets, we successfully identified critical predisease stages and tipping points before disease onset. Our findings underscore NIEE’s potential to enhance comprehension of complex disease development.

Funder

National Natural Science Foundation of China

Zhejiang Provincial Natural Science Foundation of China

UCAS

National Key Research and Development Program of China

Publisher

Oxford University Press (OUP)

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