CompaRNA: a server for continuous benchmarking of automated methods for RNA secondary structure prediction

Author:

Puton Tomasz11,Kozlowski Lukasz P.1,Rother Kristian M.11,Bujnicki Janusz M.11

Affiliation:

1. Bioinformatics Laboratory, Institute for Molecular Biology and Biotechnology, Faculty of Biology, Adam Mickiewicz University, ul. Umultowska 89, 61-614 Poznan, Poland and 2Laboratory of Bioinformatics and Protein Engineering, International Institute of Molecular and Cell Biology in Warsaw, ul. Ks. Trojdena 4, 02-109 Warsaw, Poland

Publisher

Oxford University Press (OUP)

Subject

Genetics

Reference73 articles.

1. How RNA folds;Tinoco;J. Mol. Biol.,1999

2. Revolutions in RNA secondary structure prediction;Mathews;J. Mol. Biol.,2006

3. RNA secondary structure analysis using the Vienna RNA package;Hofacker;Curr. Protoc. Bioinformatics,2004

4. RNAshapes: an integrated RNA analysis package based on abstract shapes;Steffen;Bioinformatics,2006

5. The equilibrium partition function and base pair binding probabilities for RNA secondary structure;McCaskill;Biopolymers,1990

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