Novel truncating mutations in CTNND1 cause a dominant craniofacial and cardiac syndrome

Author:

Alharatani Reham12,Ververi Athina3,Beleza-Meireles Ana14,Ji Weizhen5,Mis Emily5,Patterson Quinten T6,Griffin John N17,Bhujel Nabina8,Chang Caitlin A9ORCID,Dixit Abhijit10,Konstantino Monica5,Healy Christopher1,Hannan Sumayyah1,Neo Natsuko111,Cash Alex8,Li Dong12ORCID,Bhoj Elizabeth13,Zackai Elaine H13,Cleaver Ruth14,Baralle Diana15,McEntagart Meriel16,Newbury-Ecob Ruth17,Scott Richard3,Hurst Jane A3,Au Ping Yee Billie9,Hosey Marie Therese2,Khokha Mustafa7,Marciano Denise K6,Lakhani Saquib A5,Liu Karen J1ORCID

Affiliation:

1. Centre for Craniofacial and Regenerative Biology, Faculty of Dentistry, Oral and Craniofacial Sciences, King's College London, London SE1 9RT, UK

2. Paediatric Dentistry, Centre of Oral, Clinical and Translational Science, Faculty of Dentistry, Oral and Craniofacial Sciences, King's College London, London SE5 9RS, UK

3. Department of Clinical Genetics, Great Ormond Street Hospital Trust, London WC1N 3JH, UK

4. Department of Clinical Genetics, Guy’s and St. Thomas’ NHS Foundation Trust, London SE1 9RT, UK

5. Pediatric Genomics Discovery Program, Department of Pediatrics, Yale University School of Medicine, New Haven, CT 06520, USA

6. Departments of Internal Medicine and Cell Biology, University of Texas Southwestern Medical Center, Dallas, TX 75390-8856, USA

7. Pediatric Genomics Discovery Program, Departments of Genetics and Pediatrics, Yale University School of Medicine, New Haven, CT 06520, USA

8. South Thames Cleft Service, Guy’s and St. Thomas’ NHS Foundation Trust, London SE1 7EH, UK

9. Department of Medical Genetics, Cumming School of Medicine, Alberta Children’s Hospital Research Institute, University of Calgary, AB, Canada

10. Nottingham University Hospitals NHS Trust, Nottingham NG5 1PB, UK

11. Tokyo Medical and Dental University, Tokyo, Japan

12. Center for Applied Genomics, Children’s Hospital of Philadelphia, Philadelphia, PA 19104, USA

13. Department of Pediatrics, Division of Human Genetics, Children's Hospital of Philadelphia, Philadelphia, PA 19104, USA

14. Peninsula Clinical Genetics Service, Royal Devon and Exeter NHS Foundation Trust, Exeter EX2 5DW, UK

15. Human Development and Health, Faculty of Medicine, University of Southampton, Southampton SO17 1BJ, UK

16. Department of Clinical Genetics, St George's Hospital, London SW17 0RE, UK

17. Clinical Genetics, University Hospital Bristol NHS Foundation Trust, Bristol BS2 8EG, UK

Abstract

Abstract CTNND1 encodes the p120-catenin (p120) protein, which has a wide range of functions, including the maintenance of cell–cell junctions, regulation of the epithelial-mesenchymal transition and transcriptional signalling. Due to advances in next-generation sequencing, CTNND1 has been implicated in human diseases including cleft palate and blepharocheilodontic (BCD) syndrome albeit only recently. In this study, we identify eight novel protein-truncating variants, six de novo, in 13 participants from nine families presenting with craniofacial dysmorphisms including cleft palate and hypodontia, as well as congenital cardiac anomalies, limb dysmorphologies and neurodevelopmental disorders. Using conditional deletions in mice as well as CRISPR/Cas9 approaches to target CTNND1 in Xenopus, we identified a subset of phenotypes that can be linked to p120-catenin in epithelial integrity and turnover, and additional phenotypes that suggest mesenchymal roles of CTNND1. We propose that CTNND1 variants have a wider developmental role than previously described and that variations in this gene underlie not only cleft palate and BCD but may be expanded to a broader velocardiofacial-like syndrome.

Funder

Wellcome Trust

Health Innovation Challenge Fund

Wellcome Sanger Institute

European Xenopus Resource Centre

Biotechnology and Biological Sciences Research Council

British Heart Foundation

Medical Research Council

NIH

Publisher

Oxford University Press (OUP)

Subject

Genetics (clinical),Genetics,Molecular Biology,General Medicine

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