Incidence, aetiology, and enviromental risk factors of community-acquired pneumonia requiring hospitalization in China: a 3-year, prospective, age-stratified, multi-centre case-control study

Author:

Qin Tian1,Zhou Haijian1,Ren Hongyu1,Meng Jiantong2,Du Yinju3,Mahemut Mahemut4,Wang Peng5,Luo Nana6,Tian Fei7,Li Ming2,Zhou Pu3,Li Fang4,Duan Pengyuan5,Li Yinan1,Zhao Na1,Yuan Qiwu2,Zhang Jinzhong3,Cheng Lihong3,Luo Longze8,Fang Ming9,Huang Xin10,Gu Changguo10,Zhou Huifang11,Yang Min12,Lu Shan1,Jiang Xiangkun3,Lin Hualiang7ORCID,Tian Huaiyu6,Kan Biao1,Xu Jianguo1

Affiliation:

1. State Key Laboratory for Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China

2. Center for Disease Control and Prevention of Chengdu City, Chengdu, China

3. Center for Disease Control and Prevention of Liaocheng City, Liaocheng, China

4. Center for Disease Control and Prevention of Xinjiang Uygur Autonomous Region, Urumqi, China

5. Yunnan Key Laboratory for Zoonosis Control and Prevention, Yunnan Institute for Endemic Disease Control and Prevention, Dali, China

6. State Key Laboratory of Remote Sensing Science, Center for Global Change and Public Health, College of Global Change and Earth System Science, Beijing Normal University, Beijing, China

7. Department of Epidemiology, School of Public Health, Sun Yat-sen University, Guangzhou, China

8. Sichuan Center for Disease Control and Prevention, Chengdu, China

9. Shandong Center for Disease Control and Prevention, Jinan, China

10. Chengdu Fifth People's Hospital, Chengdu, China

11. First People’s Hospital of Kashi, Kashgar, China

12. Respiratory Department, The First People's Hospital of Dali City, Dali, China

Abstract

Abstract Background Community-acquired pneumonia (CAP) is a leading infectious cause of hospitalisation and death worldwide. The knowledge about the incidence and aetiology of CAP in China was fragmented. Methods A multicenter study performed at four hospitals in four regions in China and clinical samples from CAP patients were collected and used for pathogen identification from July 2016 to June 2019. Results A total of 1,674 patients were enrolled and the average annual incidence of hospitalized CAP was 18.7 cases per 10,000 people (95% confidence interval 18.5–19.0). The most common viral and bacterial agents found in patients were respiratory syncytial virus (19.2%) and Streptococcus pneumoniae (9.3%). The co-infections percentage was 13.8%. Pathogen distribution displayed variations within age groups, and seasonal and regional differences. The severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) was not detected. Respiratory virus detection was significantly positively correlated with air pollutants, including PM2.5, PM10, NO2 and SO2; and significantly negatively correlated with ambient temperature and O3 content; bacteria detection was opposite. Conclusion The hospitalized CAP incidence in China was higher than previously known. CAP etiology showed differences in age, seasons, regions, and respiratory viruses were detected at a higher rate than bacterial infection overall. Air pollutants and temperature have influence on the detection of pathogens.

Publisher

Oxford University Press (OUP)

Subject

Infectious Diseases,Oncology

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