Evaluation of Nasopharyngeal Swab Collection Techniques for Nucleic Acid Recovery and Participant Experience: Recommendations for COVID-19 Diagnostics

Author:

Kinloch Natalie N12,Shahid Aniqa12,Ritchie Gordon34,Dong Winnie2,Lawson Tanya3,Montaner Julio S G25,Romney Marc G34,Stefanovic Aleksandra34,Matic Nancy34,Brumme Chanson J25,Lowe Christopher F34,Brumme Zabrina L12,Leung Victor345

Affiliation:

1. Faculty of Health Sciences, Simon Fraser University, Burnaby, British Columbia, Canada

2. British Columbia Centre for Excellence in HIV/AIDS, Vancouver, British Columbia, Canada

3. Division of Medical Microbiology and Virology, St Paul’s Hospital, Vancouver, British Columbia, Canada

4. Department of Pathology and Laboratory Medicine, University of British Columbia, Vancouver, British Columbia, Canada

5. Department of Medicine, University of British Columbia, Vancouver, British Columbia, Canada

Abstract

Abstract Nasopharyngeal swabs are critical to the diagnosis of respiratory infections including coronavirus disease 2019, but collection techniques vary. We compared 2 recommended nasopharyngeal swab collection techniques in adult volunteers and found that swab rotation following nasopharyngeal contact did not recover additional nucleic acid (as measured by human DNA/RNA copy number). Rotation was also less tolerable for participants. Notably, both discomfort and nucleic acid recovery were significantly higher in Asian participants, consistent with nasal anatomy differences. Our results suggest that it is unnecessary to rotate the swab in place following contact with the nasopharynx and reveal that procedural discomfort levels can differ by ethnicity.

Funder

Genome BC COVID-19 Rapid Response

Canadian Institutes for Health Research

Michael Smith Foundation for Health Research

Publisher

Oxford University Press (OUP)

Subject

Infectious Diseases,Oncology

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