DeepLoc: prediction of protein subcellular localization using deep learning-Reference-Cited by-同舟云学术

DeepLoc: prediction of protein subcellular localization using deep learning

Published:2017-07-07 Issue:21 Volume:33 Page:3387-3395
ISSN:1367-4803
Container-title:Bioinformatics
language:en
Short-container-title:

Author:

Almagro Armenteros José Juan¹²,Sønderby Casper Kaae²,Sønderby Søren Kaae²,Nielsen Henrik¹,Winther Ole²³

Affiliation:

1. Department of Bio and Health Informatics, Technical University of Denmark, 2800 Kgs. Lyngby, Denmark

2. The Bioinformatics Centre, Department of Biology, University of Copenhagen, Copenhagen N, Denmark

3. DTU Compute, Technical University of Denmark, 2800 Kgs. Lyngby, Denmark

Publisher

Oxford University Press (OUP)

Subject

Computational Mathematics,Computational Theory and Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Statistics and Probability

Link

http://academic.oup.com/bioinformatics/article-pdf/33/21/3387/25166063/btx431.pdf

Reference30 articles.

1. Assessing the accuracy of prediction algorithms for classification: an overview;Baldi;Bioinformatics,2000

2. Multiloc2: integrating phylogeny and gene ontology terms improves subcellular protein localization prediction;Blum;BMC Bioinformatics,2009

3. Sherloc2: a high-accuracy hybrid method for predicting subcellular localization of proteins;Briesemeister;J. Proteome Res,2009

4. YLoc–an interpretable web server for predicting subcellular localization;Briesemeister;Nucleic Acids Res,2010

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