RNA–DNA and DNA–DNA base-pairing at the upstream edge of the transcription bubble regulate translocation of RNA polymerase and transcription rate-Reference-Cited by-同舟云学术

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RNA–DNA and DNA–DNA base-pairing at the upstream edge of the transcription bubble regulate translocation of RNA polymerase and transcription rate

Published:2018-05-16 Issue:11 Volume:46 Page:5764-5775
ISSN:0305-1048
Container-title:Nucleic Acids Research
language:en
Short-container-title:

Author:

KIreeva Maria¹,Trang Cyndi¹,Matevosyan Gayane¹,Turek-Herman Joshua¹,Chasov Vitaly¹,Lubkowska Lucyna¹,Kashlev Mikhail¹

Affiliation:

1. RNA Biology Laboratory, Center for Cancer Research, National Cancer Institute, Frederick, MD 21702, USA

Funder

National Institutes of Health

Publisher

Oxford University Press (OUP)

Subject

Genetics

Link

http://academic.oup.com/nar/article-pdf/46/11/5764/25067462/gky393.pdf

Reference57 articles.

1. Translocation by multi-subunit RNA polymerases;Kireeva;Biochim. Biophys. Acta,2010

2. A movie of the RNA polymerase nucleotide addition cycle;Brueckner;Curr. Opin. Struct. Biol.,2009

3. Translocation and fidelity of Escherichia coli RNA polymerase;Nedialkov;Transcription,2013

4. RNA polymerase II with open and closed trigger loops: active site dynamics and nucleic acid translocation;Feig;Biophys. J.,2010

5. Structural basis of transcription elongation;Martinez-Rucobo;Biochim. Biophys. Acta,2013

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1. Navigating the Rugged Landscape of Transcription: Nusg–Spt5 Proteins as Universal But Dissociable Stabilizers;2024

2. Robust regulation of transcription pausing in Escherichia coli by the ubiquitous elongation factor NusG;Proceedings of the National Academy of Sciences;2023-06-05

3. First passage time study of DNA strand displacement;Biophysical Journal;2021-06

4. Basic mechanisms and kinetics of pause-interspersed transcript elongation;Nucleic Acids Research;2020-12-16

5. Bayesian inference and comparison of stochastic transcription elongation models;PLOS Computational Biology;2020-02-14

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