gRINN: a tool for calculation of residue interaction energies and protein energy network analysis of molecular dynamics simulations

Author:

Serçinoğlu Onur1,Ozbek Pemra1ORCID

Affiliation:

1. Department of Bioengineering, Faculty of Engineering, Marmara University, Kadikoy, Istanbul 34722, Turkey

Funder

Marmara University

Publisher

Oxford University Press (OUP)

Subject

Genetics

Reference56 articles.

1. Discovery through the computational microscope;Lee;Structure,2009

2. Biomolecular Simulation: A computational microscope for molecular biology;Dror;Annu. Rev. Biophys.,2012

3. Molecular dynamics simulations: advances and applications;Hospital;Adv. Appl. Bioinform. Chem.,2015

4. Current state-of-the-art molecular dynamics methods and applications;Vlachakis;Adv. Protein Chem. Struct. Biol.,2014

5. A comparison of multiscale methods for the analysis of molecular dynamics simulations;Benson;J. Phys. Chem. B,2012

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