Insights into the role of alternative splicing in plant temperature response

Author:

Dikaya Varvara1ORCID,El Arbi Nabila1ORCID,Rojas-Murcia Nelson1ORCID,Nardeli Sarah Muniz1ORCID,Goretti Daniela1ORCID,Schmid Markus12ORCID

Affiliation:

1. Umeå Plant Science Centre, Department of Plant Physiology, Umeå University, SE-901 87 Umeå, Sweden

2. Beijing Advanced Innovation Centre for Tree Breeding by Molecular Design, Beijing Forestry University, Beijing 100083, People’s Republic of China

Abstract

Abstract Alternative splicing occurs in all eukaryotic organisms. Since the first description of multiexon genes and the splicing machinery, the field has expanded rapidly, especially in animals and yeast. However, our knowledge about splicing in plants is still quite fragmented. Though eukaryotes show some similarity in the composition and dynamics of their splicing machinery, observations of unique plant traits are only starting to emerge. For instance, plant alternative splicing is closely linked to their ability to perceive various environmental stimuli. Due to their sessile lifestyle, temperature is a central source of information, allowing plants to adjust their development to match current growth conditions. Hence, seasonal temperature fluctuations and day–night cycles can strongly influence plant morphology across developmental stages. Here we discuss available data on temperature-dependent alternative splicing in plants. Given its fragmented state, it is not always possible to fit specific observations into a coherent picture, yet it is sufficient to estimate the complexity of this field and the need for further research. Better understanding of alternative splicing as a part of plant temperature response and adaptation may also prove to be a powerful tool for both fundamental and applied sciences.

Funder

Knut och Alice Wallenbergs Stiftelse

Publisher

Oxford University Press (OUP)

Subject

Plant Science,Physiology

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