INCAWrapper: a Python wrapper for INCA for seamless data import, -export, and -processing

Abstract

Abstract Motivation INCA is a powerful tool for metabolic flux analysis, however, import and export of data and results can be tedious and limit the use of INCA in automated workflows. Results The INCAWrapper enables the use of INCA purely through Python, which allows the use of INCA in common data science workflows. Availability and implementation The INCAWrapper is implemented in Python and can be found at https://github.com/biosustain/incawrapper. It is freely available under an MIT License. To run INCA, the user needs their own MATLAB and INCA licenses. INCA is freely available for noncommercial use at mfa.vueinnovations.com.