ChagasDB: 80 years of publicly available data on the molecular host response to Trypanosoma cruzi infection in a single database

Author:

Brochet Pauline1ORCID,Mouren Jean-Christophe1ORCID,Hannouche Laurent2ORCID,Lopez Fabrice1ORCID,Ballester Benoit1ORCID,Cunha-Neto Edecio345ORCID,Spinelli Lionel1ORCID,Chevillard Christophe1ORCID

Affiliation:

1. Institut National de la Santé Et de la Recherche Médicale (INSERM), Unité Mixte de Recherche (UMR)_1090, Aix Marseille Université, TAGC Theories and Approaches of Genomic Complexity, Institut MarMaRa , Marseille 13288, France

2. C2VN, INSERM, INRA, Aix Marseille Université , Marseille 13005, France

3. Laboratory of Immunology, Heart Institute Instituto do Coração (InCor), University of São Paulo, School of Medicine , São Paulo 05403-900, Brazil

4. Division of Clinical Immunology and Allergy, University of São Paulo, School of Medicine , São Paulo 05403-900, Brazil

5. Instituto Nacional de Ciência e Tecnologia, INCT, III- Institute for Investigation in Immunology , São Paulo 05403-900, Brazil

Abstract

Abstract Chagas disease is a parasitical disease caused by Trypanosoma cruzi which affects ∼7 million people worldwide. Per year, ∼10 000 people die from this pathology. Indeed, ∼30% of humans develop severe chronic forms, including cardiac, digestive or neurological disorders, for which there is still no treatment. In order to facilitate research on Chagas disease, a manual curation of all papers corresponding to ‘Chagas disease’ referenced on PubMed has been performed. All deregulated molecules in hosts (all mammals, humans, mice or others) following T. cruzi infection were retrieved and included in a database, named ChagasDB. A website has been developed to make this database accessible to all. In this article, we detail the construction of this database, its contents and how to use it. Database URL https://chagasdb.tagc.univ-amu.fr

Funder

Aix-Marseille University

Institut National de la Santé et de la Recherche Médicale

French Agency

Brazilian National Research Council

COFECUB

Inserm

CAPES

Agence Nationale de la Recherche

FAPESP

Anr

Publisher

Oxford University Press (OUP)

Subject

General Agricultural and Biological Sciences,General Biochemistry, Genetics and Molecular Biology,Information Systems

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