Centralizing neurofibromatosis experimental tool knowledge with the NF Research Tools Database

Author:

Clayton Ashley1,DeFelice Mialy1,Zalmanek Brynn1,Hodgson Jay1,Morin Caroline2,Simon Stockard1,Bletz Julie A1,Eddy James A1,Nikolov Milen1,Banerjee Jineta1,Vinnakota Kalyan2,Marasca Marco1,Boske Kevin J1,Hoff Bruce1,Bradic Ljubomir1,Kim YooRi2,Goss James R2,Allaway Robert J1ORCID

Affiliation:

1. Sage Bionetworks, 2901 Third Ave., Suite 330 , Seattle, WA 98121, USA

2. Gilbert Family Foundation, 1074 Woodward Ave. , Detroit, MI 48226, USA

Abstract

Abstract Experimental tools and resources, such as animal models, cell lines, antibodies, genetic reagents and biobanks, are key ingredients in biomedical research. Investigators face multiple challenges when trying to understand the availability, applicability and accessibility of these tools. A major challenge is keeping up with current information about the numerous tools available for a particular research problem. A variety of disease-agnostic projects such as the Mouse Genome Informatics database and the Resource Identification Initiative curate a number of types of research tools. Here, we describe our efforts to build upon these resources to develop a disease-specific research tool resource for the neurofibromatosis (NF) research community. This resource, the NF Research Tools Database, is an open-access database that enables the exploration and discovery of information about NF type 1-relevant animal models, cell lines, antibodies, genetic reagents and biobanks. Users can search and explore tools, obtain detailed information about each tool as well as read and contribute their observations about the performance, reliability and characteristics of tools in the database. NF researchers will be able to use the NF Research Tools Database to promote, discover, share, reuse and characterize research tools, with the goal of advancing NF research. Database URL: https://tools.nf.synapse.org/.

Funder

Gilbert Family Foundation

Publisher

Oxford University Press (OUP)

Subject

General Agricultural and Biological Sciences,General Biochemistry, Genetics and Molecular Biology,Information Systems

Reference14 articles.

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