Community-led comparative genomic and phenotypic analysis of the aquaculture pathogen Pseudomonas baetica a390T sequenced by Ion semiconductor and Nanopore technologies

Author:

Beaton Ainsley1,Lood Cédric23,Cunningham-Oakes Edward4,MacFadyen Alison5,Mullins Alex J4,Bestawy Walid El1,Botelho João6,Chevalier Sylvie7,Coleman Shannon8ORCID,Dalzell Chloe1,Dolan Stephen K9,Faccenda Alberto1,Ghequire Maarten G K2,Higgins Steven10,Kutschera Alexander11,Murray Jordan1,Redway Martha1,Salih Talal1,da Silva Ana C12ORCID,Smith Brian A13,Smits Nathan3,Thomson Ryan1,Woodcock Stuart14,Welch Martin9ORCID,Cornelis Pierre7,Lavigne Rob3,van Noort Vera2,Tucker Nicholas P1ORCID

Affiliation:

1. Strathclyde Institute of Pharmacy and Biomedical Science, University of Strathclyde, 161 Cathedral Street, Glasgow, G4 0RE, UK

2. Centre of Microbial and Plant Genetics, KU Leuven, Kasteelpark Arenberg 20, bus 2460, Leuven B-3001, Belgium

3. Laboratory of Gene Technology, KU Leuven, Kasteelpark Arenberg 20, bus 2460, Leuven B-3001, Belgium

4. Cardiff School of Biosciences, Cardiff University, Sir Martin Evans Building, Park Place, Cardiff CF10 3AX, UK

5. Royal (Dick) School of Veterinary Studies, University of Edinburgh, Easter Bush Campus, Midlothian EH25 9RG, Scotland, UK

6. UCIBIO/REQUIMTE, Laboratório de Microbiologia, Faculdade de Farmácia, Universidade do Porto, Rua de Jorge Viterbo Ferreira no. 228 Porto 4050-313, Portugal

7. Laboratoire Microbiologie Signaux et Microenvironnement (LMSM), Université de Rouen, 55, rue St Germain, Evreux 27000, France

8. Lower Mall Research Station, University of British Columbia, 2259 Lower Mall, Vancouver, BC V6T 1Z4, Canada

9. Department of Biochemistry, University of Cambridge, Hopkins Building, Tennis Court Road, Cambridge CB2 1QW, UK

10. Department of Plant and Microbial Biology, University of Zürich, Zürich 8008, Switzerland

11. Department of Phytopathology, Center of Life and Food Sciences, Technical University of Munich, Weihenstephan D-85354, Germany

12. Centre for Biomolecular Sciences, School of Life Sciences, University of Nottingham, Nottingham NG7 2RD, UK

13. School of Plant Sciences, The University of Arizona, P.O. Box 210036, Forbes Building, 303 Tucson, Arizona 85721-0036, USA

14. Department of Biological Chemistry, John Innes Centre, Colney Lane, Norwich NR4 7UH, UK

Funder

Biotechnology and Biological Sciences Research Council

Chief Scientists Office

FWO Vlaanderen

Fundação para a Ciência e a Tecnologia

Publisher

Oxford University Press (OUP)

Subject

Genetics,Molecular Biology,Microbiology

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