Integration of diffusion tensor imaging parameters with mesh morphing for in-depth analysis of brain white matter fibre tracts

Author:

Tayebi Maryam12,Kwon Eryn12,Maller Jerome3,McGeown Josh2,Scadeng Miriam24,Qiao Miao5,Wang Alan14,Nielsen Poul16,Fernandez Justin126,Holdsworth Samantha24,Shim Vickie12ORCID, ,Potter Leigh,Condron Paul,Taylor Davidson,Cornfield Daniel,McHugh Patrick,Emsden Taylor,Danesh-Meyer Helen,Newburn Gil,Bydder Graeme

Affiliation:

1. Auckland Bioengineering Institute, The University of Auckland , Auckland, 1010 , New Zealand

2. Mātai Medical Research Institute , Gisborne, 4010 , New Zealand

3. GE Healthcare , Richmond, Victoria, 3122 , Australia

4. Faculty of Medical and Health Sciences, The University of Auckland , Auckland, 1023 , New Zealand

5. Department of Computer Science, The University of Auckland , Auckland, 1010 , New Zealand

6. Department of Engineering Science, The University of Auckland , Auckland, 1010 , New Zealand

Abstract

Abstract Averaging is commonly used for data reduction/aggregation to analyse high-dimensional MRI data, but this often leads to information loss. To address this issue, we developed a novel technique that integrates diffusion tensor metrics along the whole volume of the fibre bundle using a 3D mesh-morphing technique coupled with principal component analysis for delineating case and control groups. Brain diffusion tensor MRI scans of high school rugby union players (n = 30, age 16–18) were acquired on a 3 T MRI before and after the sports season. A non-contact sport athlete cohort with matching demographics (n = 12) was also scanned. The utility of the new method in detecting differences in diffusion tensor metrics of the right corticospinal tract between contact and non-contact sport athletes was explored. The first step was to run automated tractography on each subject’s native space. A template model of the right corticospinal tract was generated and morphed into each subject’s native shape and space, matching individual geometry and diffusion metric distributions with minimal information loss. The common dimension of the 20 480 diffusion metrics allowed further data aggregation using principal component analysis to cluster the case and control groups as well as visualization of diffusion metric statistics (mean, ±2 SD). Our approach of analysing the whole volume of white matter tracts led to a clear delineation between the rugby and control cohort, which was not possible with the traditional averaging method. Moreover, our approach accounts for the individual subject’s variations in diffusion tensor metrics to visualize group differences in quantitative MR data. This approach may benefit future prediction models based on other quantitative MRI methods.

Funder

Kānoa Regional Economic Development & Investment Unit

Ministry of Business Innovation and Employment

Strategic Fund NZ-Singapore Data Science Research Programme

Health Research Council of New Zealand

Hugh Green Foundation

Publisher

Oxford University Press (OUP)

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