Translation efficiency affects the sequence-independent +1 ribosomal frameshifting by polyamines

Author:

Oguro Akihiro1,Shigeta Tomoaki2,Machida Kodai2,Suzuki Tomoaki2,Iwamoto Takeo3,Matsufuji Senya1,Imataka Hiroaki2

Affiliation:

1. Department of Molecular Biology, The Jikei University School of Medicine, 3-25-8 Nishi-shimbashi, Minato-Ku, Tokyo 105-8461, Japan

2. Department of Applied Chemistry, Graduate School of Engineering, University of Hyogo, 2167 Shosha, Himeji 671-2280, Japan

3. Core Research Facilities for Basic Science (Molecular Cell Biology), The Jikei University School of Medicine, 3-25-8 Nishi-shimbashi, Minato-Ku, Tokyo 105-8461, Japan

Abstract

AbstractAntizyme (AZ) interacts with ornithine decarboxylase, which catalyzes the first step of polyamine biosynthesis and recruits it to the proteasome for degradation. Synthesizing the functional AZ protein requires transition of the reading frame at the termination codon. This programmed +1 ribosomal frameshifting is induced by polyamines, but the molecular mechanism is still unknown. In this study, we explored the mechanism of polyamine-dependent +1 frameshifting using a human cell-free translation system. Unexpectedly, spermidine induced +1 frameshifting in the mutants replacing the termination codon at the shift site with a sense codon. Truncation experiments showed that +1 frameshifting occurred promiscuously in various positions of the AZ sequence. The probability of this sequence-independent +1 frameshifting increased in proportion to the length of the open reading frame. Furthermore, the +1 frameshifting was induced in some sequences other than the AZ gene in a polyamine-dependent manner. These findings suggest that polyamines have the potential to shift the reading frame in the +1 direction in any sequence. Finally, we showed that the probability of the sequence-independent +1 frameshifting by polyamines is likely inversely correlated with translation efficiency. Based on these results, we propose a model of the molecular mechanism for AZ +1 frameshifting.

Funder

Jikei University Research Fund

JSPS KAKENHI

Ministry of Education, Culture, Sports, Science and Technology

MEXT

Publisher

Oxford University Press (OUP)

Subject

Molecular Biology,Biochemistry,General Medicine

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