A deep boosting based approach for capturing the sequence binding preferences of RNA-binding proteins from high-throughput CLIP-seq data

Author:

Li Shuya1,Dong Fanghong2,Wu Yuexin23,Zhang Sai2,Zhang Chen2,Liu Xiao1ORCID,Jiang Tao45ORCID,Zeng Jianyang2

Affiliation:

1. School of Life Sciences, Tsinghua University, Beijing 100084, China

2. Institute for Interdisciplinary Information Sciences, Tsinghua University, Beijing 100084, China

3. Present address: Language Technologies Institute, Carnegie Mellon University, Pittsburgh, PA 15232, USA

4. Department of Computer Science and Engineering, University of California, Riverside, CA 92521, USA

5. MOE Key Lab of Bioinformatics and Bioinformatics Division, TNLIST/Department of Computer Science and Technology, Tsinghua University, Beijing 100084, China

Publisher

Oxford University Press (OUP)

Subject

Genetics

Cited by 19 articles. 订阅此论文施引文献 订阅此论文施引文献,注册后可以免费订阅5篇论文的施引文献,订阅后可以查看论文全部施引文献

1. Self-Attention Based Neural Network for Predicting RNA-Protein Binding Sites;IEEE/ACM Transactions on Computational Biology and Bioinformatics;2023-03-01

2. Computational tools to study RNA-protein complexes;Frontiers in Molecular Biosciences;2022-10-07

3. Application of novel deep boosting framework-based earthquake induced landslide hazards prediction approach in Sikkim Himalaya;Geocarto International;2022-05-08

4. 3D Modeling of Non-coding RNA Interactions;Advances in Experimental Medicine and Biology;2022

5. Protein–RNA interaction prediction with deep learning: structure matters;Briefings in Bioinformatics;2021-12-21

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