WikiPathways 2024: next generation pathway database-Reference-Cited by-同舟云学术

WikiPathways 2024: next generation pathway database

Published:2023-11-06 Issue:D1 Volume:52 Page:D679-D689
ISSN:0305-1048
Container-title:Nucleic Acids Research
language:en
Short-container-title:

Author:

Agrawal Ayushi¹^ORCID,Balcı Hasan²^ORCID,Hanspers Kristina¹^ORCID,Coort Susan L³^ORCID,Martens Marvin³^ORCID,Slenter Denise N³^ORCID,Ehrhart Friederike³^ORCID,Digles Daniela⁴^ORCID,Waagmeester Andra⁵^ORCID,Wassink Isabel²^ORCID,Abbassi-Daloii Tooba³^ORCID,Lopes Elisson N⁶^ORCID,Iyer Aishwarya³^ORCID,Acosta Javier Millán³^ORCID,Willighagen Lars G⁷^ORCID,Nishida Kozo⁸^ORCID,Riutta Anders¹^ORCID,Basaric Helena³,Evelo Chris T³^ORCID,Willighagen Egon L³^ORCID,Kutmon Martina²^ORCID,Pico Alexander R¹^ORCID

Affiliation:

1. Data Science and Biotechnology, Gladstone Institutes , San Francisco, CA, 94158, USA

2. Maastricht Centre for Systems Biology (MaCSBio), Maastricht University , The Netherlands

3. Department of Bioinformatics - BiGCaT, NUTRIM, Maastricht University , The Netherlands

4. Department of Pharmaceutical Sciences, University of Vienna , Austria

5. Micelio BV , Ekeren, Belgium

6. Department of Epigenetics. Van Andel Institute , Grand Rapids, MI 49503, USA

7. Unaffiliated , The Netherlands

8. Department of Biotechnology and Life Science, Tokyo University of Agriculture and Technology , Japan

Abstract

Abstract WikiPathways (wikipathways.org) is an open-source biological pathway database. Collaboration and open science are pivotal to the success of WikiPathways. Here we highlight the continuing efforts supporting WikiPathways, content growth and collaboration among pathway researchers. As an evolving database, there is a growing need for WikiPathways to address and overcome technical challenges. In this direction, WikiPathways has undergone major restructuring, enabling a renewed approach for sharing and curating pathway knowledge, thus providing stability for the future of community pathway curation. The website has been redesigned to improve and enhance user experience. This next generation of WikiPathways continues to support existing features while improving maintainability of the database and facilitating community input by providing new functionality and leveraging automation.

Funder

National Institute of General Medical Sciences

ZonMw

NWO

European Union’s Horizon 2020

ELIXIR Europe

Publisher

Oxford University Press (OUP)

Subject

Genetics

Link

https://academic.oup.com/nar/article-pdf/52/D1/D679/55040703/gkad960.pdf