DrugBank 6.0: the DrugBank Knowledgebase for 2024

Author:

Knox Craig1,Wilson Mike1,Klinger Christen M1,Franklin Mark1,Oler Eponine2,Wilson Alex1,Pon Allison1,Cox Jordan1,Chin Na Eun (Lucy)1,Strawbridge Seth A1,Garcia-Patino Marysol1,Kruger Ray2,Sivakumaran Aadhavya2,Sanford Selena2,Doshi Rahil2,Khetarpal Nitya2,Fatokun Omolola2,Doucet Daphnee2,Zubkowski Ashley2,Rayat Dorsa Yahya2,Jackson Hayley2,Harford Karxena2,Anjum Afia2,Zakir Mahi2,Wang Fei2,Tian Siyang2,Lee Brian2,Liigand Jaanus23,Peters Harrison2,Wang Ruo Qi (Rachel)1,Nguyen Tue1,So Denise1,Sharp Matthew1,da Silva Rodolfo1,Gabriel Cyrella1,Scantlebury Joshua1,Jasinski Marissa1,Ackerman David1,Jewison Timothy1,Sajed Tanvir2,Gautam Vasuk2,Wishart David S2456ORCID

Affiliation:

1. OMx Personal Health Analytics, Inc. , 700–10130 103 St NW, Edmonton , AB T5J 1B9 , Canada

2. Department of Biological Sciences, University of Alberta , Edmonton , AB T6G 2E9 , Canada

3. Institute of Chemistry, University of Tartu , Tartu , Estonia

4. Department of Computing Science, University of Alberta , Edmonton , AB T6G 2E8 , Canada

5. Faculty of Pharmacy and Pharmaceutical Sciences, University of Alberta , Edmonton , AB T6G 2H1 , Canada

6. Department of Laboratory Medicine and Pathology, University of Alberta , Edmonton , AB T6G 1C9 , Canada

Abstract

Abstract First released in 2006, DrugBank (https://go.drugbank.com) has grown to become the ‘gold standard’ knowledge resource for drug, drug–target and related pharmaceutical information. DrugBank is widely used across many diverse biomedical research and clinical applications, and averages more than 30 million views/year. Since its last update in 2018, we have been actively enhancing the quantity and quality of the drug data in this knowledgebase. In this latest release (DrugBank 6.0), the number of FDA approved drugs has grown from 2646 to 4563 (a 72% increase), the number of investigational drugs has grown from 3394 to 6231 (a 38% increase), the number of drug–drug interactions increased from 365 984 to 1 413 413 (a 300% increase), and the number of drug–food interactions expanded from 1195 to 2475 (a 200% increase). In addition to this notable expansion in database size, we have added thousands of new, colorful, richly annotated pathways depicting drug mechanisms and drug metabolism. Likewise, existing datasets have been significantly improved and expanded, by adding more information on drug indications, drug–drug interactions, drug–food interactions and many other relevant data types for 11 891 drugs. We have also added experimental and predicted MS/MS spectra, 1D/2D-NMR spectra, CCS (collision cross section), RT (retention time) and RI (retention index) data for 9464 of DrugBank's 11 710 small molecule drugs. These and other improvements should make DrugBank 6.0 even more useful to a much wider research audience ranging from medicinal chemists to metabolomics specialists to pharmacologists.

Funder

Canadian Institutes of Health Research

Natural Sciences and Engineering Research Council

Alliance Program

Alberta Innovates

Genome Alberta

Publisher

Oxford University Press (OUP)

Subject

Genetics

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