On the effective depth of viral sequence data-Reference-Cited by-同舟云学术

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On the effective depth of viral sequence data

Published:2017-07-01 Issue:2 Volume:3 Page:
ISSN:2057-1577
Container-title:Virus Evolution
language:en
Short-container-title:

Author:

Illingworth Christopher J R¹²,Roy Sunando³,Beale Mathew A⁴^ORCID,Tutill Helena³,Williams Rachel³,Breuer Judith³

Affiliation:

1. Department of Genetics, University of Cambridge, Cambridge, UK

2. Department of Applied Maths and Theoretical Physics, Centre for Mathematical Sciences, University of Cambridge, Cambridge, UK

3. Division of Infection and Immunity, University College London, London, UK

4. Wellcome Trust Sanger Institute, Hinxton, Cambridge, UK

Funder

Seventh Framework Programme

Wellcome Trust

Publisher

Oxford University Press (OUP)

Subject

Virology,Microbiology

Link

http://academic.oup.com/ve/article-pdf/3/2/vex030/21908537/vex030.pdf

Reference58 articles.

1. Mutational and fitness landscapes of an RNA virus revealed through population sequencing;Acevedo;Nature,2014

2. Distinct HIV-1 long terminal repeat quasispecies present in nervous tissues compared to that in lung, blood and lymphoid tissues of an AIDS patient;Ait-Khaled;AIDS,1995

3. The evolutionary analysis of emerging low frequency HIV-1 CXCR4 using variants through time? An ultra-deep approach;Archer;PLoS Computational Biology,2010

4. Global migration dynamics underlie evolution and persistence of human influenza A (H3N2);Bedford;PLoS Pathogens,2010

5. Ultra-deep sequencing for the analysis of viral populations;Beerenwinkel;Current Opinion Virology,2011

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