PointFinder: a novel web tool for WGS-based detection of antimicrobial resistance associated with chromosomal point mutations in bacterial pathogens-Reference-Cited by-同舟云学术

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PointFinder: a novel web tool for WGS-based detection of antimicrobial resistance associated with chromosomal point mutations in bacterial pathogens

Published:2017-07-19 Issue:10 Volume:72 Page:2764-2768
ISSN:0305-7453
Container-title:Journal of Antimicrobial Chemotherapy
language:en
Short-container-title:

Author:

Zankari Ea¹²,Allesøe Rosa²,Joensen Katrine G³,Cavaco Lina M¹,Lund Ole²,Aarestrup Frank M¹

Affiliation:

1. National Food Institute, Technical University of Denmark, 2800 Kgs Lyngby, Denmark

2. Center for Biological Sequence Analysis, Department of Systems Biology, Technical University of Denmark, 2800 Kgs Lyngby, Denmark

3. Department of Microbiology and Infection Control, Statens Serum Institut, Copenhagen, Denmark

Funder

Center for Genomic Epidemiology

Danish Council for Strategic Research

Publisher

Oxford University Press (OUP)

Subject

Infectious Diseases,Pharmacology (medical),Pharmacology,Microbiology (medical)

Link

http://academic.oup.com/jac/article-pdf/72/10/2764/24331921/dkx217.pdf

Reference37 articles.

1. Genotyping using whole-genome sequencing is a realistic alternative to surveillance based on phenotypic antimicrobial susceptibility testing;Zankari;J Antimicrob Chemother,2013

2. Predicting antimicrobial susceptibilities for Escherichia coli and Klebsiella pneumoniae isolates using whole genomic sequence data;Stoesser;J Antimicrob Chemother,2013

3. Rapid antibiotic-resistance predictions from genome sequence data for Staphylococcus aureus and Mycobacterium tuberculosis;Bradley;Nat Commun,2015

4. Mechanisms of quinolone resistance in Escherichia coli and Salmonella: recent developments;Hopkins;Int J Antimicrob Agents,2005

5. gyrB mutations which confer coumarin resistance also affect DNA supercoiling and ATP hydrolysis by Escherichia coli DNA gyrase;Confreres;Mol Microbiol,1992

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