Modeling the structure of the transmembrane domain of T1R3, a subunit of the sweet taste receptor, with neohesperidin dihydrochalcone using molecular dynamics simulation

Author:

Nakagita Tomoya123ORCID,Matsuya Takumi1,Narukawa Masataka14,Kobayashi Takuya2,Hirokawa Takatsugu56,Misaka Takumi1ORCID

Affiliation:

1. Department of Applied Biological Chemistry, Graduate School of Agricultural and Life Sciences, The University of Tokyo , Tokyo , Japan

2. Department of Cell Biology, Graduate School of Medicine, Kyoto University , Kyoto , Japan

3. Department of Agricultural Chemistry, School of Agriculture, Meiji University , Kawasaki, Kanagawa , Japan

4. Department of Food and Nutrition, Kyoto Women's University , Kyoto , Japan

5. Division of Biomedical Science, Faculty of Medicine, University of Tsukuba , Tsukuba , Japan

6. Transborder Medical Research Center, University of Tsukuba , Tsukuba , Japan

Abstract

ABSTRACT Neohesperidin dihydrochalcone (NHDC) is a sweetener, which interacts with the transmembrane domain (TMD) of the T1R3 subunit of the human sweet taste receptor. Although NHDC and a sweet taste inhibitor lactisole share similar structural motifs, they have opposite effects on the receptor. This study involved the creation of an NHDC-docked model of T1R3 TMD through mutational analyses followed by in silico simulations. When certain NHDC derivatives were docked to the model, His7345.44 was demonstrated to play a crucial role in activating T1R3 TMD. The NHDC-docked model was then compared with a lactisole-docked inactive form, several residues were characterized as important for the recognition of NHDC; however, most of them were distinct from those of lactisole. Residues such as His6413.33 and Gln7947.38 were found to be oriented differently. This study provides useful information that will facilitate the design of sweeteners and inhibitors that interact with T1R3 TMD.

Funder

JSPS

AMED

Publisher

Oxford University Press (OUP)

Subject

Organic Chemistry,Molecular Biology,Applied Microbiology and Biotechnology,General Medicine,Biochemistry,Analytical Chemistry,Biotechnology

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