circSamd4 represses myogenic transcriptional activity of PUR proteins

Author:

Pandey Poonam R1,Yang Jen-Hao1,Tsitsipatis Dimitrios1,Panda Amaresh C2,Noh Ji Heon13,Kim Kyoung Mi14,Munk Rachel1,Nicholson Thomas5,Hanniford Douglas6,Argibay Diana6,Yang Xiaoling1,Martindale Jennifer L1,Chang Ming-Wen1,Jones Simon W5,Hernando Eva6,Sen Payel1,De Supriyo1,Abdelmohsen Kotb1,Gorospe Myriam1ORCID

Affiliation:

1. Laboratory of Genetics and Genomics, National Institute on Aging Intramural Research Program, National Institutes of Health, Baltimore, MD 21224, USA

2. Institute of Life Sciences, Nalco Square, Bhubaneswar, Odisha, India

3. Department of Biotechnology, Chonnam National University, Yeosu, Chonnam, Republic of Korea

4. Department of Biological Sciences, Chungnam National University, Daejeon, Republic of Korea

5. Institute of Inflammation and Ageing, MRC-ARUK Centre for Musculoskeletal Ageing Research, University of Birmingham, Birmingham, UK

6. Department of Pathology, New York University School of Medicine, New York, NY, USA

Abstract

Abstract By interacting with proteins and nucleic acids, the vast family of mammalian circRNAs is proposed to influence many biological processes. Here, RNA sequencing analysis of circRNAs differentially expressed during myogenesis revealed that circSamd4 expression increased robustly in mouse C2C12 myoblasts differentiating into myotubes. Moreover, silencing circSamd4, which is conserved between human and mouse, delayed myogenesis and lowered the expression of myogenic markers in cultured myoblasts from both species. Affinity pulldown followed by mass spectrometry revealed that circSamd4 associated with PURA and PURB, two repressors of myogenesis that inhibit transcription of the myosin heavy chain (MHC) protein family. Supporting the hypothesis that circSamd4 might complex with PUR proteins and thereby prevent their interaction with DNA, silencing circSamd4 enhanced the association of PUR proteins with the Mhc promoter, while overexpressing circSamd4 interfered with the binding of PUR proteins to the Mhc promoter. These effects were abrogated when using a mutant circSamd4 lacking the PUR binding site. Our results indicate that the association of PUR proteins with circSamd4 enhances myogenesis by contributing to the derepression of MHC transcription.

Funder

Versus Arthritis

NIH

Leveraged Finance Fights Melanoma-MRA Team Science Award

Publisher

Oxford University Press (OUP)

Subject

Genetics

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