MicroRNA dilution during oocyte growth disables the microRNA pathway in mammalian oocytes

Author:

Kataruka Shubhangini1,Modrak Martin2ORCID,Kinterova Veronika3,Malik Radek1,Zeitler Daniela M4,Horvat Filip15,Kanka Jiri3,Meister Gunter4,Svoboda Petr1ORCID

Affiliation:

1. Institute of Molecular Genetics of the Czech Academy of Sciences, Videnska 1083, 142 20 Prague 4, Czech Republic

2. Institute of Microbiology of the Czech Academy of Sciences, Videnska 1083, 142 20 Prague 4, Czech Republic

3. Institute of Animal Physiology and Genetics of the Czech Academy of Sciences, Rumburská 89, 277 21 Liběchov, Czech Republic

4. RNA Biology, Biochemistry Center Regensburg, University of Regensburg, 93053 Regensburg, Germany

5. Bioinformatics Group, Division of Molecular Biology, Department of Biology, Faculty of Science, University of Zagreb, Horvatovac 102a, 10000 Zagreb, Croatia

Abstract

Abstract MicroRNAs (miRNAs) are ubiquitous small RNAs guiding post-transcriptional gene repression in countless biological processes. However, the miRNA pathway in mouse oocytes appears inactive and dispensable for development. We propose that marginalization of the miRNA pathway activity stems from the constraints and adaptations of RNA metabolism elicited by the diluting effects of oocyte growth. We report that miRNAs do not accumulate like mRNAs during the oocyte growth because miRNA turnover has not adapted to it. The most abundant miRNAs total tens of thousands of molecules in growing (∅ 40 μm) and fully grown (∅ 80 μm) oocytes, a number similar to that observed in much smaller fibroblasts. The lack of miRNA accumulation results in a 100-fold lower miRNA concentration in fully grown oocytes than in somatic cells. This brings a knock-down-like effect, where diluted miRNAs engage targets but are not abundant enough for significant repression. Low-miRNA concentrations were observed in rat, hamster, porcine and bovine oocytes, arguing that miRNA inactivity is not mouse-specific but a common mammalian oocyte feature. Injection of 250,000 miRNA molecules was sufficient to restore reporter repression in mouse and porcine oocytes, suggesting that miRNA inactivity comes from low-miRNA abundance and not from some suppressor of the pathway.

Funder

European Research Council

The Ministry of Education, Youth and Sports

Deutsche Forschungsgemeinschaft

IAPG Institutional Support RVO

MEYS, ELIXIR CZ Research Infrastructure

Charles University in Prague

Publisher

Oxford University Press (OUP)

Subject

Genetics

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