Complex Temporal Biology: Towards a Unified Multi-Scale Approach to Predict the Flow of Information

Author:

Alicea Bradly12ORCID,Yuan Chongli3

Affiliation:

1. OpenWorm Foundation, Boston, MA

2. Orthogonal Research and Education Lab, Champaign-Urbana, IL

3. Davidson School of Chemical Engineering, Purdue University, West Lafayette, IN

Abstract

Synopsis Two hallmarks of biological processes are complexity and time. While complexity can have many meanings, in this paper we propose an explicit link to the flow of time and how it is experienced by the organism. While the flow of time is rooted in constraints of fundamental physics, understanding the operation of biological systems in terms of processual flow and tempo is more elusive. Fortunately, the convergence of new computational and methodological perspectives will provide a means to transform complicated, nonlinear paths between related phenomena at different time scales into dynamic four-dimensional perspectives. According to the complex temporal biology approach, information flow between time scales of multiple lengths is a transformational process that acts to regulate life's complexity. Interactions between temporal intervals of differing magnitude and otherwise loosely-related mechanisms can be understood as inter-timescale information flow. We further propose that informational flow between time scales is the glue that binds the multiple vertical layers of biocomplexity, as well as yielding surprising outcomes ranging from complex behaviors to the persistence of lineages. Building a foundation of rules based on common interactions between orders of time and common experiential contexts would help to reintegrate biology. Emerging methodologies such as state-of-the-art imaging, visualization techniques, and computational data analysis can help us uncover these interactions. In conclusion, we propose educational and community-level changes that would better enable our vision.

Publisher

Oxford University Press (OUP)

Subject

Plant Science,Animal Science and Zoology

Reference29 articles.

1. From seconds to eons: time scales, hierarchies, and processes in evo-devo;Baedke;Stud Hist Philos Sci Part C Stud Hist Philos Biol Biomed Sci,2018

2. A 2-dimensional geometry for biological time;Bailly;Prog Biophys Mol Biol,2011

3. Biosemiotics: a new understanding of life;Barbieri;Naturwissenschaften,2008

4. Proteomic analysis of a Pleistocene mammoth femur reveals more than one hundred ancient bone proteins;Cappellini;J Proteome Res,2012

5. Operational coherence as the source of truth;Chang;Proc Aristotel Soc,2017

Cited by 4 articles. 订阅此论文施引文献 订阅此论文施引文献,注册后可以免费订阅5篇论文的施引文献,订阅后可以查看论文全部施引文献

同舟云学术

1.学者识别学者识别

2.学术分析学术分析

3.人才评估人才评估

"同舟云学术"是以全球学者为主线,采集、加工和组织学术论文而形成的新型学术文献查询和分析系统,可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容,当前同舟云学术共收录了国内外主流学术期刊6万余种,收集的期刊论文及会议论文总量共计约1.5亿篇,并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询!咨询电话:010-8811{复制后删除}0370

www.globalauthorid.com

TOP

Copyright © 2019-2024 北京同舟云网络信息技术有限公司
京公网安备11010802033243号  京ICP备18003416号-3