Unique contributions of chlorophyll and nitrogen to predict crop photosynthetic capacity from leaf spectroscopy

Author:

Wang Sheng12ORCID,Guan Kaiyu123,Wang Zhihui4,Ainsworth Elizabeth A1256,Zheng Ting4,Townsend Philip A4,Li Kaiyuan12,Moller Christopher5,Wu Genghong12,Jiang Chongya12

Affiliation:

1. College of Agricultural, Consumer and Environmental Sciences, University of Illinois at Urbana-Champaign, Urbana, IL, USA

2. Center for Advanced Bioenergy and Bioproducts Innovation, Institute for Sustainability, Energy, and Environment, University of Illinois at Urbana-Champaign, Urbana, IL, USA

3. National Center for Supercomputing Applications, University of Illinois at Urbana-Champaign, Urbana, IL, USA

4. Department of Forest and Wildlife Ecology, University of Wisconsin-Madison, 1630 Linden Drive, Madison, WI, USA

5. Department of Plant Biology, University of Illinois at Urbana-Champaign, Urbana, IL, USA

6. USDA ARS Global Change and Photosynthesis Research Unit, Urbana, IL, USA

Abstract

Abstract The photosynthetic capacity or the CO2-saturated photosynthetic rate (Vmax), chlorophyll, and nitrogen are closely linked leaf traits that determine C4 crop photosynthesis and yield. Accurate, timely, rapid, and non-destructive approaches to predict leaf photosynthetic traits from hyperspectral reflectance are urgently needed for high-throughput crop monitoring to ensure food and bioenergy security. Therefore, this study thoroughly evaluated the state-of-the-art physically based radiative transfer models (RTMs), data-driven partial least squares regression (PLSR), and generalized PLSR (gPLSR) models to estimate leaf traits from leaf-clip hyperspectral reflectance, which was collected from maize (Zea mays L.) bioenergy plots with diverse genotypes, growth stages, treatments with nitrogen fertilizers, and ozone stresses in three growing seasons. The results show that leaf RTMs considering bidirectional effects can give accurate estimates of chlorophyll content (Pearson correlation r=0.95), while gPLSR enabled retrieval of leaf nitrogen concentration (r=0.85). Using PLSR with field measurements for training, the cross-validation indicates that Vmax can be well predicted from spectra (r=0.81). The integration of chlorophyll content (strongly related to visible spectra) and nitrogen concentration (linked to shortwave infrared signals) can provide better predictions of Vmax (r=0.71) than only using either chlorophyll or nitrogen individually. This study highlights that leaf chlorophyll content and nitrogen concentration have key and unique contributions to Vmax prediction.

Funder

U.S. Department of Energy

Office of Science

Office of Biological and Environmental Research

NASA New Investigator Award and Carbon Monitoring System program

NASA Terrestrial Ecology Program

National Institute of Food and Agriculture

NASA Jet Propulsion Laboratory

NSF Macrosystems Biology

USDA Hatch award

Publisher

Oxford University Press (OUP)

Subject

Plant Science,Physiology

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