The impact of the Fungus-Host-Microbiota interplay upon Candida albicans infections: current knowledge and new perspectives

Author:

d'Enfert Christophe1ORCID,Kaune Ann-Kristin2,Alaban Leovigildo-Rey34,Chakraborty Sayoni56,Cole Nathaniel7,Delavy Margot14,Kosmala Daria14,Marsaux Benoît89,Fróis-Martins Ricardo1011,Morelli Moran12,Rosati Diletta13ORCID,Valentine Marisa5,Xie Zixuan14,Emritloll Yoan1,Warn Peter A15,Bequet Frédéric3,Bougnoux Marie-Elisabeth1,Bornes Stephanie16,Gresnigt Mark S5,Hube Bernhard5,Jacobsen Ilse D5,Legrand Mélanie1,Leibundgut-Landmann Salomé1011,Manichanh Chaysavanh14,Munro Carol A2,Netea Mihai G13,Queiroz Karla12,Roget Karine17,Thomas Vincent3,Thoral Claudia17,Van den Abbeele Pieter8,Walker Alan W7,Brown Alistair J P18ORCID

Affiliation:

1. Unité Biologie et Pathogénicité Fongiques, Département de Mycologie, Institut Pasteur, USC 2019 INRA, 25, rue du Docteur Roux, 75015 Paris, France

2. Aberdeen Fungal Group, Institute of Medical Sciences, University of Aberdeen, Ashgrove Road West, Foresterhill, Aberdeen AB25 2ZD, UK

3. BIOASTER Microbiology Technology Institute, 40 avenue Tony Garnier, 69007 Lyon, France

4. Université de Paris, Sorbonne Paris Cité, 25, rue du Docteur Roux, 75015 Paris, France

5. Microbial Immunology Research Group, Emmy Noether Junior Research Group Adaptive Pathogenicity Strategies, and the Department of Microbial Pathogenicity Mechanisms, Leibniz Institute for Natural Product Research and Infection Biology – Hans Knöll Institute, Beutenbergstraße 11a, 07745 Jena, Germany

6. Institute of Microbiology, Friedrich Schiller University, Neugasse 25, 07743 Jena, Germany

7. Gut Microbiology Group, Rowett Institute, University of Aberdeen, Ashgrove Road West, Foresterhill, Aberdeen AB25 2ZD, UK

8. ProDigest BV, Technologiepark 94, B-9052 Gent, Belgium

9. Center for Microbial Ecology and Technology (CMET), Department of Biotechnology, Faculty of Bioscience Engineering, Ghent University, Coupure Links, 9000 Ghent, Belgium

10. Immunology Section, Vetsuisse Faculty, University of Zurich, Winterthurerstrasse 266a, Zurich 8057, Switzerland

11. Institute of Experimental Immunology, University of Zurich, Winterthurerstrasse 190, Zürich 8057, Switzerland

12. Mimetas, Biopartner Building 2, J.H. Oortweg 19, 2333 CH Leiden, The Netherlands

13. Department of Internal Medicine and Radboud Center for Infectious Diseases, Radboud University Medical Center, Geert Grooteplein 28, 6525 GA Nijmegen, The Netherlands

14. Gut Microbiome Group, Vall d'Hebron Institut de Recerca (VHIR), Vall d'Hebron Hospital Universitari, Vall d'Hebron Barcelona Hospital Campus, Passeig Vall d'Hebron 119–129, 08035 Barcelona, Spain

15. Magic Bullet Consulting, Biddlecombe House, Ugbrook, Chudleigh Devon, TQ130AD, UK

16. Université Clermont Auvergne, INRAE, VetAgro Sup, UMRF0545, 20 Côte de Reyne, 15000 Aurillac, France

17. NEXBIOME Therapeutics, 22 allée Alan Turing, 63000 Clermont-Ferrand, France

18. MRC Centre for Medical Mycology, Department of Biosciences, University of Exeter, Geoffrey Pope Building, Stocker Road, Exeter EX4 4QD, UK

Abstract

ABSTRACT Candida albicans is a major fungal pathogen of humans. It exists as a commensal in the oral cavity, gut or genital tract of most individuals, constrained by the local microbiota, epithelial barriers and immune defences. Their perturbation can lead to fungal outgrowth and the development of mucosal infections such as oropharyngeal or vulvovaginal candidiasis, and patients with compromised immunity are susceptible to life-threatening systemic infections. The importance of the interplay between fungus, host and microbiota in driving the transition from C. albicans commensalism to pathogenicity is widely appreciated. However, the complexity of these interactions, and the significant impact of fungal, host and microbiota variability upon disease severity and outcome, are less well understood. Therefore, we summarise the features of the fungus that promote infection, and how genetic variation between clinical isolates influences pathogenicity. We discuss antifungal immunity, how this differs between mucosae, and how individual variation influences a person's susceptibility to infection. Also, we describe factors that influence the composition of gut, oral and vaginal microbiotas, and how these affect fungal colonisation and antifungal immunity. We argue that a detailed understanding of these variables, which underlie fungal-host-microbiota interactions, will present opportunities for directed antifungal therapies that benefit vulnerable patients.

Funder

Swiss National Science Foundation

Deutsche Forschungsgemeinschaft

Wellcome Trust

Medical Research Council

Publisher

Oxford University Press (OUP)

Subject

Infectious Diseases,Microbiology

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