SeqCode in the golden age of prokaryotic systematics

Author:

Jiménez Diego Javier1,Rosado Alexandre Soares1

Affiliation:

1. Biological and Environmental Sciences and Engineering Division (BESE), King Abdullah University of Science and Technology (KAUST) , Thuwal 23955-6900, Kingdom of Saudi Arabia

Abstract

Abstract The SeqCode is a new code of prokaryotic nomenclature that was developed to validate taxon names using genome sequences as the type material. The present article provides an independent view about the SeqCode, highlighting its history, current status, basic features, pros and cons, and use to date. We also discuss important topics to consider for validation of novel prokaryotic taxon names using genomes as the type material. Owing to significant advances in metagenomics and cultivation methods, hundreds of novel prokaryotic species are expected to be discovered in the coming years. This manuscript aims to stimulate and enrich the debate around the use of the SeqCode in the upcoming golden age of prokaryotic taxon discovery and systematics.

Funder

King Abdullah University of Science and Technology

Publisher

Oxford University Press (OUP)

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