Rapid detection of CTX-M-type ESBLs and carbapenemases directly from biological samples using the BL-DetecTool

Author:

Volland Hervé1,Ballesté-Delpierre Clara2,Szabó Dóra3,Gonzalez Camille4,Takissian Julie4,Aszalos Albert Zoltan5,Ostorhazi Eszter3,Farkas Szilvia5,Kamotsay Katalin6,Rosenmoller Magda7,Stankov-Pugès Milovan8,Francius Laura8,Boutigny Laure8,Sivan Virginie1,Simon Stéphanie1,Gelhaye Stéphanie1,Bosch Jordi29,Vila Jordi2910,Naas Thierry41112ORCID

Affiliation:

1. Université Paris-Saclay, CEA, INRAE, Département Médicaments et Technologies pour la Santé (DMTS), SPI , 91191 Gif-sur-Yvette , France

2. University of Barcelona, Institute for Global Health (ISGlobal), Hospital Clínic - Barcelona , Spain

3. Semmelweis University, Institute of Medical Microbiology , Budapest , Hungary

4. Assistance Publique-Hôpitaux de Paris, Hôpital Bicêtre, Bacteriology-Hygiene unit , Le Kremlin-Bicêtre , France

5. Semmelweis University, Health Services Management Training Centre , Budapest , Hungary

6. Central Microbiology Laboratory, Central Hospital of Southern Pest National Institute of Hematology and Infectious Disease , Budapest , Hungary

7. IESE Bussiness School , Barcelona , Spain

8. NG Biotech, R&D Department , Guipry , France

9. University of Barcelona, Hospital Clínic, Department of Clinical Microbiology - CDB , Barcelona , Spain

10. CIBER de Enfermedades Infecciosas (CIBERINFEC), ISCIII , Madrid , Spain

11. Team ‘Resist’ UMR1184 ‘Immunology of Viral, Auto-Immune, Hematological and Bacterial diseases (IMVA-HB)’, INSERM, University Paris-Saclay, CEA, LabEx LERMIT, Faculty of Medicine , Le Kremlin-Bicêtre , France

12. Associated French National Reference Center for Antibiotic Resistance: Carbapenemase-producing Enterobacterales , Le Kremlin-Bicêtre , France

Abstract

Abstract Background Lateral flow immunoassays (LFIA) have shown their usefulness for detecting CTX-M- and carbapenemase-producing Enterobacterales (CPEs) in bacterial cultures. Here, we have developed and validated the BL-DetecTool to detect CTX-M enzymes and carbapenemases directly from clinical samples. Methods The BL-DetecTool is an LFIA that integrates an easy sample preparation device named SPID (Sampling, Processing, Incubation and Detection). It was evaluated in three University hospitals on urine, blood culture (BC) and rectal swab (RS) specimens either of clinical origin or on spiked samples. RS evaluation was done directly and after a 24 h enrichment step. Results The CTX-M BL-DetecTool was tested on 485 samples (154 BC, 150 urines, and 181 RS) and revealed a sensitivity and specificity of 97.04% (95% CI 92.59%–99.19%) and 99.43% (95% CI 97.95%–99.93%), respectively. Similarly, the Carba5 BL-DetecTool was tested on 382 samples (145 BC, 116 urines, and 121 RS) and revealed a sensitivity and specificity of 95.3% (95% CI 89.43%–98.47%) and 100% (95% CI 98.67%–100%), respectively. While with the Carba5 BL-DetecTool five false negatives were observed, mostly in RS samples, with the CTX-M BL-DetecTool, in addition to four false-negatives, two false-positives were also observed. Direct testing of RS samples revealed a sensitivity of 78% and 86% for CTX-M and carbapenemase detection, respectively. Conclusions BL-DetecTool showed excellent biological performance, was easy-to-use, rapid, and could be implemented in any microbiology laboratory around the world, without additional equipment, no need for electricity, nor trained personnel. It offers an attractive alternative to costly molecular methods.

Publisher

Oxford University Press (OUP)

Subject

Infectious Diseases,Pharmacology (medical),Pharmacology,Microbiology (medical)

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