Analysis of bacterial and archaeal communities associated with Fogo volcanic soils of different ages

Author:

Biderre-Petit Corinne1,Hochart Corentin2,Gardon Hélène1,Dugat-Bony Eric3,Terrat Sébastien4,Jouan-Dufournel Isabelle1,Paris Raphaël5

Affiliation:

1. CNRS, Laboratoire Microorganismes: Génome et Environnement, Université Clermont Auvergne, F-63000 Clermont-Ferrand, France

2. CNRS, Laboratoire d'Ecogéochimie des Environnements Benthiques (LECOB), Observatoire Océanologique de Banyuls, Sorbonne Université, F-66650 Banyuls sur Mer, France

3. INRAE, AgroParisTech, UMR SayFood, Université Paris-Saclay, F-78850, Thiverval-Grignon, France

4. Agroécologie, AgroSup Dijon, INRAE, Université Bourgogne Franche-Comté, F-21000 Dijon, France

5. CNRS, IRD, OPGC, Laboratoire Magmas et Volcans, Université Clermont Auvergne, F-63000 Clermont-Ferrand, France

Abstract

ABSTRACT Basaltic rocks play a significant role in CO2 sequestration from the atmosphere during their weathering. Moreover, the primary microorganisms that colonize them, by providing mineral elements and nutrients, are shown to promote growth of diverse heterotrophic communities and plants, therefore positively impacting Earth's long-term climate balance. However, the first steps of microbial colonization and subsequent rock weathering remain poorly understood, especially regarding microbial communities over a chronological sequence. Here, we analyzed the microbial communities inhabiting the soil developed in crevices on lava flows derived from different eruptions on Fogo Island. Investigated soils show typically low carbon and nitrogen content and are relatively similar to one another regarding their phylogenetic composition, and similar to what was recorded in large soil surveys with dominance of Actinobacteria and Proteobacteria. Moreover, our results suggest a stronger effect of the organic carbon than the lava flow age in shaping microbial communities as well as the possibility of exogenous sources of bacteria as important colonizers. Furthermore, archaea reach up to 8.4% of the total microbial community, dominated by the Soil Crenarchaeotic Group, including the ammonium-oxidizer Candidatus Nitrososphaera sp. Therefore, this group might be largely responsible for ammonia oxidation under the environmental conditions found on Fogo.

Funder

Ministère de l'Enseignement Supérieur et de la Recherche

CNRS

Clermont University Auvergne

Laboratory of Excellence ClerVolc contribution

Publisher

Oxford University Press (OUP)

Subject

Applied Microbiology and Biotechnology,Ecology,Microbiology

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