Genome of a novel Sediminibacterium discovered in association with two species of freshwater cyanobacteria from streams in Southern California

Author:

Sethuraman Arun12ORCID,Stancheva Rosalina1ORCID,Sanders Ciara1ORCID,Caceres Lakme134ORCID,Castro David1,Hausknecht-Buss Hannah15ORCID,Henry Simone15ORCID,Johansen Haven16ORCID,Kasler Antolette1ORCID,Lastor Sandy17ORCID,Massaro Isabelle1ORCID,Mekuria Immanuel1ORCID,Moron-Solano Andrea18ORCID,Read Niki1,Vengerova Gretchen19ORCID,Zhang Andrew110ORCID,Zhang Xiaoyu1ORCID,Read Betsy1ORCID

Affiliation:

1. Department of Biology, San Diego State University , San Diego, CA 92182, USA

2. Department of Biological Sciences, California State University San Marcos , San Marcos, California USA 92096, USA

3. Palomar College , San Marcos, CA 92069, USA

4. University of San Diego , San Diego, CA 92110, USA

5. Scripps College , Claremont, CA 91711, USA

6. Western Washington University , Bellingham, WA 98225, USA

7. Bay Path University , Long Meadow, MA 01106, USA

8. University of California , Davis, Davis, CA 95616, USA

9. City College of San Francisco , San Francisco, CA 94112, USA

10. Indiana University Bloomington , Bloomington, IN 47405, USA

Abstract

Abstract Here, we report the discovery of a novel Sediminibacterium sequenced from laboratory cultures of freshwater stream cyanobacteria from sites in Southern California, grown in BG11 medium. Our genome-wide analyses reveal a highly contiguous and complete genome (97% BUSCO) that is placed within sediminibacterial clades in phylogenomic analyses. Functional annotation indicates the presence of genes that could be involved in mutualistic/commensal relationship with associated cyanobacterial hosts.

Funder

NSF-REU

National Science Foundation

US Army Research Laboratory

San Diego State University

NSF

NIH

Publisher

Oxford University Press (OUP)

Subject

Genetics (clinical),Genetics,Molecular Biology

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