Characterization of a novel polyextremotolerant fungus, Exophiala viscosa, with insights into its melanin regulation and ecological niche

Author:

Carr Erin C1,Barton Quin1,Grambo Sarah2,Sullivan Mitchell1,Renfro Cecile M3,Kuo Alan4,Pangilinan Jasmyn4,Lipzen Anna4,Keymanesh Keykhosrow4,Savage Emily4,Barry Kerrie4,Grigoriev Igor V45,Riekhof Wayne R1,Harris Steven D6

Affiliation:

1. School of Biological Sciences, University of Nebraska-Lincoln , Lincoln, NE 68588 , USA

2. Roy J. Carver Department of Biochemistry, Biophysics, and Molecular Biology, Iowa State University , Ames, IA 50011 , USA

3. Department of Agronomy and Horticulture, University of Nebraska-Lincoln , Lincoln, NE 68588 , USA

4. US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory , Berkeley, CA 94720 , USA

5. Department of Plant and Microbial Biology, University of California Berkeley , Berkeley, CA 94720 , USA

6. Department of Plant Pathology, Entomology and Microbiology, Iowa State University , Ames, IA 50011 , USA

Abstract

Abstract Black yeasts are polyextremotolerant fungi that contain high amounts of melanin in their cell wall and maintain a primar yeast form. These fungi grow in xeric, nutrient depletes environments which implies that they require highly flexible metabolisms and have been suggested to contain the ability to form lichen-like mutualisms with nearby algae and bacteria. However, the exact ecological niche and interactions between these fungi and their surrounding community are not well understood. We have isolated 2 novel black yeasts from the genus Exophiala that were recovered from dryland biological soil crusts. Despite notable differences in colony and cellular morphology, both fungi appear to be members of the same species, which has been named Exophiala viscosa (i.e. E. viscosa JF 03-3 Goopy and E. viscosa JF 03-4F Slimy). A combination of whole genome sequencing, phenotypic experiments, and melanin regulation experiments have been performed on these isolates to fully characterize these fungi and help decipher their fundamental niche within the biological soil crust consortium. Our results reveal that E. viscosa is capable of utilizing a wide variety of carbon and nitrogen sources potentially derived from symbiotic microbes, can withstand many forms of abiotic stresses, and excretes melanin which can potentially provide ultraviolet resistance to the biological soil crust community. Besides the identification of a novel species within the genus Exophiala, our study also provides new insight into the regulation of melanin production in polyextremotolerant fungi.

Funder

NASA

NSF PRFB

U.S. Department of Education

NSF REU

Office of Science of the U.S. Department of Energy

Publisher

Oxford University Press (OUP)

Subject

Genetics (clinical),Genetics,Molecular Biology

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