A survey of automated methods for biomedical text simplification

Author:

Ondov Brian1ORCID,Attal Kush1ORCID,Demner-Fushman Dina1ORCID

Affiliation:

1. Computational Health Research Branch, National Library of Medicine , Bethesda, Maryland, USA

Abstract

Abstract Objective Plain language in medicine has long been advocated as a way to improve patient understanding and engagement. As the field of Natural Language Processing has progressed, increasingly sophisticated methods have been explored for the automatic simplification of existing biomedical text for consumers. We survey the literature in this area with the goals of characterizing approaches and applications, summarizing existing resources, and identifying remaining challenges. Materials and Methods We search English language literature using lists of synonyms for both the task (eg, “text simplification”) and the domain (eg, “biomedical”), and searching for all pairs of these synonyms using Google Scholar, Semantic Scholar, PubMed, ACL Anthology, and DBLP. We expand search terms based on results and further include any pertinent papers not in the search results but cited by those that are. Results We find 45 papers that we deem relevant to the automatic simplification of biomedical text, with data spanning 7 natural languages. Of these (nonexclusively), 32 describe tools or methods, 13 present data sets or resources, and 9 describe impacts on human comprehension. Of the tools or methods, 22 are chiefly procedural and 10 are chiefly neural. Conclusions Though neural methods hold promise for this task, scarcity of parallel data has led to continued development of procedural methods. Various low-resource mitigations have been proposed to advance neural methods, including paragraph-level and unsupervised models and augmentation of neural models with procedural elements drawing from knowledge bases. However, high-quality parallel data will likely be crucial for developing fully automated biomedical text simplification.

Funder

Intramural Research Program of the National Library of Medicine

National Institutes of Health

Publisher

Oxford University Press (OUP)

Subject

Health Informatics

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