Development of electronic health record based algorithms to identify individuals with diabetic retinopathy

Author:

Breeyear Joseph H12ORCID,Mitchell Sabrina L23,Nealon Cari L4,Hellwege Jacklyn N256,Charest Brian7,Khakharia Anjali89,Halladay Christopher W10,Yang Janine11,Garriga Gustavo A12,Wilson Otis D213,Basnet Til B2512,Hung Adriana M213,Reaven Peter D1415,Meigs James B161718,Rhee Mary K819,Sun Yang20,Lynch Mary G8,Sobrin Lucia11,Brantley Milam A235,Sun Yan V82122ORCID,Wilson Peter W823,Iyengar Sudha K2425,Peachey Neal S242627,Phillips Lawrence S819,Edwards Todd L12,Giri Ayush12512ORCID

Affiliation:

1. Division of Epidemiology, Department of Medicine, Vanderbilt University Medical Center , Nashville, TN 37232, United States

2. VA Tennessee Valley Healthcare System (626) , Nashville, TN 37212, United States

3. Department of Ophthalmology and Visual Sciences, Vanderbilt University Medical Center , Nashville, TN 37232, United States

4. Eye Clinic, VA Northeast Ohio Healthcare System , Cleveland, OH 44106, United States

5. Vanderbilt Genetics Institute, Vanderbilt University , Nashville, TN 37232, United States

6. Division of Genetic Medicine, Department of Medicine, Vanderbilt University Medical Center , Nashville, TN 37232, United States

7. Massachusetts Veterans Epidemiology Research and Information Center (MAVERIC), VA Boston Healthcare System , Boston, MA 02111, United States

8. VA Atlanta Healthcare System , Decatur, GA 30033, United States

9. Department of Medicine and Geriatrics, Emory University School of Medicine , Atlanta, GA 30307, United States

10. Providence VA Medical Center , Providence, RI 02908, United States

11. Department of Ophthalmology, Mass Eye and Ear Infirmary, Harvard Medical School , Boston, MA 02114, United States

12. Division of Quantitative and Clinical Sciences, Department of Obstetrics and Gynecology, Vanderbilt University Medical Center , Nashville, TN 37232, United States

13. Division of Nephrology and Hypertension, Department of Medicine, Vanderbilt University Medical Center , Nashville, TN 37232, United States

14. Phoenix VA Health Care System , Phoenix, AZ 85012, United States

15. College of Medicine, University of Arizona , Phoenix, AZ 85721, United States

16. Program in Medical and Population Genetics, Broad Institute , Cambridge, MA 02142, United States

17. Department of Medicine, Harvard Medical School , Boston, MA 02115, United States

18. Division of General Internal Medicine, Massachusetts General Hospital , Boston, MA 02114, United States

19. Division of Endocrinology, Metabolism, and Lipids, Department of Medicine, Emory University School of Medicine , Atlanta, GA 30307, United States

20. Department of Ophthalmology, Stanford University School of Medicine , Palo Alto, CA 94305, United States

21. Department of Epidemiology, Emory University Rollins School of Public Health , Atlanta, GA 30307, United States

22. Department of Biomedical Informatics, Emory University School of Medicine , Atlanta, GA 30307, United States

23. Division of Cardiology, Department of Medicine, Emory University School of Medicine , Atlanta, GA 30307, United States

24. Research Service, VA Northeast Ohio Healthcare System , Cleveland, OH 44106, United States

25. Department of Population and Quantitative Health Sciences, Case Western Reserve University School of Medicine , Cleveland, OH 44106, United States

26. Cole Eye Institute, Cleveland Clinic , Cleveland, OH 44106, United States

27. Department of Ophthalmology, Cleveland Clinic Lerner College of Medicine of Case Western Reserve University , Cleveland, OH 44195, United States

Abstract

Abstract Objectives To develop, validate, and implement algorithms to identify diabetic retinopathy (DR) cases and controls from electronic health care records (EHRs). Materials and Methods We developed and validated electronic health record (EHR)-based algorithms to identify DR cases and individuals with type I or II diabetes without DR (controls) in 3 independent EHR systems: Vanderbilt University Medical Center Synthetic Derivative (VUMC), the VA Northeast Ohio Healthcare System (VANEOHS), and Massachusetts General Brigham (MGB). Cases were required to meet 1 of the following 3 criteria: (1) 2 or more dates with any DR ICD-9/10 code documented in the EHR, (2) at least one affirmative health-factor or EPIC code for DR along with an ICD9/10 code for DR on a different day, or (3) at least one ICD-9/10 code for any DR occurring within 24 hours of an ophthalmology examination. Criteria for controls included affirmative evidence for diabetes as well as an ophthalmology examination. Results The algorithms, developed and evaluated in VUMC through manual chart review, resulted in a positive predictive value (PPV) of 0.93 for cases and negative predictive value (NPV) of 0.91 for controls. Implementation of algorithms yielded similar metrics in VANEOHS (PPV = 0.94; NPV = 0.86) and lower in MGB (PPV = 0.84; NPV = 0.76). In comparison, the algorithm for DR implemented in Phenome-wide association study (PheWAS) in VUMC yielded similar PPV (0.92) but substantially reduced NPV (0.48). Implementation of the algorithms to the Million Veteran Program identified over 62 000 DR cases with genetic data including 14 549 African Americans and 6209 Hispanics with DR. Conclusions/Discussion We demonstrate the robustness of the algorithms at 3 separate healthcare centers, with a minimum PPV of 0.84 and substantially improved NPV than existing automated methods. We strongly encourage independent validation and incorporation of features unique to each EHR to enhance algorithm performance for DR cases and controls.

Funder

National Institutes of Health

VA Office of Research and Development

Publisher

Oxford University Press (OUP)

同舟云学术

1.学者识别学者识别

2.学术分析学术分析

3.人才评估人才评估

"同舟云学术"是以全球学者为主线,采集、加工和组织学术论文而形成的新型学术文献查询和分析系统,可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容,当前同舟云学术共收录了国内外主流学术期刊6万余种,收集的期刊论文及会议论文总量共计约1.5亿篇,并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询!咨询电话:010-8811{复制后删除}0370

www.globalauthorid.com

TOP

Copyright © 2019-2024 北京同舟云网络信息技术有限公司
京公网安备11010802033243号  京ICP备18003416号-3