Homologous Recombination Deficiency: Concepts, Definitions, and Assays

Author:

Stewart Mark D1ORCID,Merino Vega Diana1,Arend Rebecca C2,Baden Jonathan F3,Barbash Olena4,Beaubier Nike5,Collins Grace1,French Tim6,Ghahramani Negar7,Hinson Patsy8,Jelinic Petar9,Marton Matthew J9,McGregor Kimberly10,Parsons Jerod5,Ramamurthy Lakshman11,Sausen Mark3,Sokol Ethan S10,Stenzinger Albrecht12,Stires Hillary1ORCID,Timms Kirsten M13,Turco Diana13,Wang Iris14,Williams J Andrew15,Wong-Ho Elaine16,Allen Jeff1

Affiliation:

1. Friends of Cancer Research, Washington, DC, USA

2. Division of Gynecologic Oncology, University of Alabama at Birmingham, Birmingam, AL, USA

3. Translational Medicine, Bristol Myers Squibb, New York, NY, USA

4. Oncology Experimental Medicine Unit, GlaxoSmithKline, Philadelphia, PA, USA

5. Tempus Labs, Inc., Chicago, IL, USA

6. Global Medical Affairs, Diagnostics, AstraZeneca, Cambridge, UK

7. Molecular Genetic Pathology Regional Laboratory, SCPMG Regional Reference Laboratories, Los Angeles, CA, USA

8. Independent Cancer Research Patient Advocate, Charlotte, NC, USA

9. Early Clinical Oncology, Merck & Co., Inc., Kenilworth, NJ, USA

10. Cancer Genomics Research Group, Foundation Medicine, Cambridge, MA, USA

11. Global Regulatory Affairs, GlaxoSmithKline, Washington, DC, USA

12. Institute of Pathology, University Hospital Heidelberg, Heidelberg, Germany

13. Myriad Genetics, Inc., Salt Lake City, UT, USA

14. Global Precision Medicine, Novartis Pharmaceuticals Corporation, New York, NY, USA

15. Precision Medicine & Biosamples, AstraZeneca, Cambridge, UK

16. Clinical Sequencing Division, Thermo Fisher Scientific, San Francisco, CA, USA

Abstract

Abstract Background Homologous recombination deficiency (HRD) is a phenotype that is characterized by the inability of a cell to effectively repair DNA double-strand breaks using the homologous recombination repair (HRR) pathway. Loss-of-function genes involved in this pathway can sensitize tumors to poly(adenosine diphosphate [ADP]-ribose) polymerase (PARP) inhibitors and platinum-based chemotherapy, which target the destruction of cancer cells by working in concert with HRD through synthetic lethality. However, to identify patients with these tumors, it is vital to understand how to best measure homologous repair (HR) status and to characterize the level of alignment in these measurements across different diagnostic platforms. A key current challenge is that there is no standardized method to define, measure, and report HR status using diagnostics in the clinical setting. Methods Friends of Cancer Research convened a consortium of project partners from key healthcare sectors to address concerns about the lack of consistency in the way HRD is defined and methods for measuring HR status. Results This publication provides findings from the group’s discussions that identified opportunities to align the definition of HRD and the parameters that contribute to the determination of HR status. The consortium proposed recommendations and best practices to benefit the broader cancer community. Conclusion Overall, this publication provides additional perspectives for scientist, physician, laboratory, and patient communities to contextualize the definition of HRD and various platforms that are used to measure HRD in tumors.

Funder

Friends of Cancer Research

Publisher

Oxford University Press (OUP)

Subject

Cancer Research,Oncology

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