Using the PharmCAT tool for Pharmacogenetic clinical decision support

Author:

Tippenhauer Kevin1,Philips Marwin1,Largiadèr Carlo2,Sariyar Murat1ORCID

Affiliation:

1. Bern University of Applied Sciences , Quellgasse 21, 2500 Biel, Switzerland

2. Department of Clinical Chemistry at the Bern University Hospital , Bern, Switzerland

Abstract

Abstract Here, we will provide our insights into the usage of PharmCAT as part of a pharmacogenetic clinical decision support pipeline, which addresses the challenges in mapping clinical dosing guidelines to variants to be extracted from genetic datasets. After a general outline of pharmacogenetics, we describe some features of PharmCAT and how we integrated it into a pharmacogenetic clinical decision support system within a clinical information system. We conclude with promising developments regarding future PharmCAT releases.

Publisher

Oxford University Press (OUP)

Subject

Molecular Biology,Information Systems

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