Multidimensional genome-wide screening in yeast provides mechanistic insights into europium toxicity

Author:

Pallares Roger M1,An Dahlia D1,Hébert Solène1,Faulkner David1,Loguinov Alex2,Proctor Michael2,Villalobos Jonathan A1,Bjornstad Kathleen A1,Rosen Chris J1,Vulpe Christopher2,Abergel Rebecca J13ORCID

Affiliation:

1. Chemical Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA

2. Center for Environmental and Human Toxicology, Department of Physiological Sciences, College of Veterinary Medicine, University of Florida, Gainesville, FL 32611, USA

3. Department of Nuclear Engineering, University of California, Berkeley, CA 94720, USA

Abstract

Abstract Europium is a lanthanide metal that is highly valued in optoelectronics. Even though europium is used in many commercial products, its toxicological profile has only been partially characterized, with most studies focusing on identifying lethal doses in different systems or bioaccumulation in vivo. This paper describes a genome-wide toxicogenomic study of europium in Saccharomyces cerevisiae, which shares many biological functions with humans. By using a multidimensional approach and functional and network analyses, we have identified a group of genes and proteins associated with the yeast responses to ameliorate metal toxicity, which include metal discharge paths through vesicle-mediated transport, paths to regulate biologically relevant cations, and processes to reduce metal-induced stress. Furthermore, the analyses indicated that europium promotes yeast toxicity by disrupting the function of chaperones and cochaperones, which have metal-binding sites. Several of the genes and proteins highlighted in our study have human orthologues, suggesting they may participate in europium-induced toxicity in humans. By identifying the endogenous targets of europium as well as the already existing paths that can decrease its toxicity, we can determine specific genes and proteins that may help to develop future therapeutic strategies.

Funder

Lawrence Berkeley National Laboratory

U.S. Department of Energy

Publisher

Oxford University Press (OUP)

Subject

Metals and Alloys,Biochemistry,Biomaterials,Biophysics,Chemistry (miscellaneous)

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