Quantitative elemental imaging in eukaryotic algae

Author:

Schmollinger Stefan12ORCID,Chen Si3ORCID,Merchant Sabeeha S14ORCID

Affiliation:

1. California Institute for Quantitative Biosciences (QB3), University of California , Berkeley, CA 94720 , USA

2. Departments of Molecular and Cell Biology and Plant and Microbial Biology, University of California , Berkeley, CA 94720 , USA

3. X-ray Science Division, Argonne National Laboratory , Lemont, IL 60439 , USA

4. Departments of Molecular and Cell Biology and Plant and Microbial Biology, University of California,   Berkeley, CA 94720 , USA

Abstract

Abstract All organisms, fundamentally, are made from the same raw material, namely the elements of the periodic table. Biochemical diversity is achieved by how these elements are utilized, for what purpose, and in which physical location. Determining elemental distributions, especially those of trace elements that facilitate metabolism as cofactors in the active centers of essential enzymes, can determine the state of metabolism, the nutritional status, or the developmental stage of an organism. Photosynthetic eukaryotes, especially algae, are excellent subjects for quantitative analysis of elemental distribution. These microbes utilize unique metabolic pathways that require various trace nutrients at their core to enable their operation. Photosynthetic microbes also have important environmental roles as primary producers in habitats with limited nutrient supplies or toxin contaminations. Accordingly, photosynthetic eukaryotes are of great interest for biotechnological exploitation, carbon sequestration, and bioremediation, with many of the applications involving various trace elements and consequently affecting their quota and intracellular distribution. A number of diverse applications were developed for elemental imaging, allowing subcellular resolution, with X-ray fluorescence microscopy (XFM, XRF) being at the forefront, enabling quantitative descriptions of intact cells in a non-destructive method. This Tutorial Review summarizes the workflow of a quantitative, single-cell elemental distribution analysis of a eukaryotic alga using XFM.

Funder

U.S. Department of Energy

National Institutes of Health

Argonne National Laboratory

Publisher

Oxford University Press (OUP)

Subject

Metals and Alloys,Biochemistry,Biomaterials,Biophysics,Chemistry (miscellaneous)

Reference301 articles.

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