The Typhoid Fever Surveillance in Africa Program: Geospatial Sampling Frames for Household-based Studies: Lessons Learned From a Multicountry Surveillance Network in Senegal, South Africa, and Sudan

Author:

Baker Stephen12,Ali Mohammad3,Deerin Jessica Fung4,Eltayeb Muna Ahmed5,Cruz Espinoza Ligia Maria4,Gasmelseed Nagla56,Im Justin4,Panzner Ursula4,Kalckreuth Vera V4,Keddy Karen H7,Pak Gi Deok4,Park Jin Kyung4,Park Se Eun14,Sooka Arvinda8,Sow Amy Gassama910,Tall Adama9,Luby Stephen11,Meyer Christian G1213,Marks Florian24ORCID

Affiliation:

1. Oxford University Clinical Research Unit, Ho Chi Minh City, Vietnam

2. Department of Medicine, University of Cambridge, United Kingdom

3. Johns Hopkins University, Baltimore, Maryland

4. International Vaccine Institute, Seoul, Republic of Korea

5. Faculty of Medicine at the University of Gezira, Wad-Medani, Sudan

6. Faculty of Science, University of Hafr Al Batin, Saudi Arabia

7. Faculty of Health Sciences, University of the Witwatersrand

8. National Institute for Communicable Diseases, Johannesburg, South Africa

9. Institut Pasteur de Dakar, Senegal

10. Université Cheikh Anta Diop de Dakar, Senegal

11. Infectious Diseases and Geographic Medicine, Stanford University, California

12. Institute of Tropical Medicine, Eberhard Karls University, Tübingen, Germany

13. Duy Tan University, Da Nang, Vietnam

Abstract

Abstract Background Robust household sampling, commonly applied for population-based investigations, requires sampling frames or household lists to minimize selection bias. We have applied Google Earth Pro satellite imagery to constitute structure-based sampling frames at sites in Pikine, Senegal; Pietermaritzburg, South Africa; and Wad-Medani, Sudan. Here we present our experiences in using this approach and findings from assessing its applicability by determining positional accuracy. Methods Printouts of satellite imagery combined with Global Positioning System receivers were used to locate and to verify the locations of sample structures (simple random selection; weighted-stratified sampling). Positional accuracy was assessed by study site and administrative subareas by calculating normalized distances (meters) between coordinates taken from the sampling frame and on the ground using receivers. A higher accuracy in conjunction with smaller distances was assumed. Kruskal-Wallis and Dunn multiple pairwise comparisons were performed to evaluate positional accuracy by setting and by individual surveyor in Pietermaritzburg. Results The median normalized distances and interquartile ranges were 0.05 and 0.03–0.08 in Pikine, 0.09 and 0.05–0.19 in Pietermaritzburg, and 0.05 and 0.00–0.10 in Wad-Medani, respectively. Root mean square errors were 0.08 in Pikine, 0.42 in Pietermaritzburg, and 0.17 in Wad-Medani. Kruskal-Wallis and Dunn comparisons indicated significant differences by low- and high-density setting and interviewers who performed the presented approach with high accuracy compared to interviewers with poor accuracy. Conclusions The geospatial approach presented minimizes systematic errors and increases robustness and representativeness of a sample. However, the findings imply that this approach may not be applicable at all sites and settings; its success also depends on skills of surveyors working with aerial data. Methodological modifications are required, especially for resource-challenged sites that may be affected by constraints in data availability and area size.

Funder

Bill and Melinda Gates Foundation

Publisher

Oxford University Press (OUP)

Subject

Infectious Diseases,Microbiology (medical)

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