Analysis of morphological characteristics of IDH-mutant/wildtype brain tumors using whole-lesion phenotype analysis

Author:

Snyder James M1,Huang Raymond Y2,Bai Harrison3,Rao Vikram R4,Cornes Susannah4,Barnholtz-Sloan Jill S5,Gutman David6,Fasano Rebecca7,Van Meir Erwin G8,Brat Daniel9,Eschbacher Jennifer10,Quackenbush John11,Wen Patrick Y12,Lee Jong Woo13ORCID

Affiliation:

1. Departments of Neurosurgery and Neurology, Henry Ford Health System, Detroit, Michigan, USA

2. Department of Radiology, Brigham and Women’s Hospital, Harvard Medical School, Boston, Massachusetts, USA

3. Department of Diagnostic Imaging, Rhode Island Hospital and Warren Alpert Medical School of Brown University, Providence, Rhode Island, USA

4. Department of Neurology and Weill Institute for Neurosciences, University of California, San Francisco, San Francisco, California, USA

5. Department of Population and Quantitative Health Sciences, School of Medicine Case Western Reserve University and University Hospitals of Cleveland, Cleveland, Ohio, USA

6. Winship Cancer Institute, Emory University, Atlanta, Georgia, USA

7. Department of Neurology, Emory University, Atlanta, Georgia, USA

8. O’Neal Comprehensive Cancer Center, University of Alabama at Birmingham (UAB), Birmingham, Alabama, USA

9. Department of Pathology, Feinberg School of Medicine, Northwestern University, Chicago, Illinois, USA

10. St. Joseph’s Hospital and Medical Center, Phoenix, Arizona, USA

11. Department of Biostatistics, Harvard T.H. Chan School of Public Health, Center for Cancer Computational Biology, Dana Farber Cancer Institute, Boston, Massachusetts, USA

12. Center for Neuro-Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts, USA

13. Department of Neurology, Brigham and Women’s Hospital, Harvard Medical School, Boston, Massachusetts, USA

Abstract

Abstract Background Although IDH-mutant tumors aggregate to the frontotemporal regions, the clustering pattern of IDH-wildtype tumors is less clear. As voxel-based lesion-symptom mapping (VLSM) has several limitations for solid lesion mapping, a new technique, whole-lesion phenotype analysis (WLPA), is developed. We utilize WLPA to assess spatial clustering of tumors with IDH mutation from The Cancer Genome Atlas and The Cancer Imaging Archive. Methods The degree of tumor clustering segmented from T1 weighted images is measured to every other tumor by a function of lesion similarity to each other via the Hausdorff distance. Each tumor is ranked according to the degree to which its neighboring tumors show identical phenotypes, and through a permutation technique, significant tumors are determined. VLSM was applied through a previously described method. Results A total of 244 patients of mixed-grade gliomas (WHO II–IV) are analyzed, of which 150 were IDH-wildtype and 139 were glioblastomas. VLSM identifies frontal lobe regions that are more likely associated with the presence of IDH mutation but no regions where IDH-wildtype was more likely to be present. WLPA identifies both IDH-mutant and -wildtype tumors exhibit statistically significant spatial clustering. Conclusion WLPA may provide additional statistical power when compared with VLSM without making several potentially erroneous assumptions. WLPA identifies tumors most likely to exhibit particular phenotypes, rather than producing anatomical maps, and may be used in conjunction with VLSM to understand the relationship between tumor morphology and biologically relevant tumor phenotypes.

Funder

National Institute for Neurologic Disorders and Stroke

Publisher

Oxford University Press (OUP)

Subject

Electrical and Electronic Engineering,Building and Construction

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