PscanChIP: finding over-represented transcription factor-binding site motifs and their correlations in sequences from ChIP-Seq experiments
Author:
Publisher
Oxford University Press (OUP)
Subject
Genetics
Link
http://academic.oup.com/nar/article-pdf/41/W1/W535/16943601/gkt448.pdf
Reference24 articles.
1. Chromatin remodeling, histone modifications, and DNA methylation-how does it all fit together?;Geiman;J. Cell. Biochem.,2002
2. ChIP-seq and beyond: new and improved methodologies to detect and characterize protein-DNA interactions;Furey;Nat. Rev. Genet.,2012
3. Computation for ChIP-seq and RNA-seq studies;Pepke;Nat. Methods,2009
4. Motif discovery and transcription factor binding sites before and after the next-generation sequencing era;Zambelli;Brief. Bioinform.,2013
5. Pscan: finding over-represented transcription factor binding site motifs in sequences from co-regulated or co-expressed genes;Zambelli;Nucleic Acids Res.,2009
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