The Plankton Lifeform Extraction Tool: a digital tool to increase the discoverability and usability of plankton time-series data
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Published:2021-12-06
Issue:12
Volume:13
Page:5617-5642
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ISSN:1866-3516
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Container-title:Earth System Science Data
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language:en
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Short-container-title:Earth Syst. Sci. Data
Author:
Ostle ClareORCID, Paxman Kevin, Graves Carolyn A., Arnold Mathew, Artigas Luis Felipe, Atkinson Angus, Aubert Anaïs, Baptie Malcolm, Bear Beth, Bedford Jacob, Best Michael, Bresnan Eileen, Brittain Rachel, Broughton Derek, Budria Alexandre, Cook Kathryn, Devlin Michelle, Graham George, Halliday Nick, Hélaouët Pierre, Johansen Marie, Johns David G., Lear Dan, Machairopoulou Margarita, McKinney April, Mellor Adam, Milligan Alex, Pitois Sophie, Rombouts Isabelle, Scherer Cordula, Tett Paul, Widdicombe Claire, McQuatters-Gollop Abigail
Abstract
Abstract. Plankton form the base of the marine food web and are sensitive indicators
of environmental change. Plankton time series are therefore an essential
part of monitoring progress towards global biodiversity goals, such as the
Convention on Biological Diversity Aichi Targets, and for informing
ecosystem-based policy, such as the EU Marine Strategy Framework Directive.
Multiple plankton monitoring programmes exist in Europe, but differences in
sampling and analysis methods prevent the integration of their data,
constraining their utility over large spatio-temporal scales. The Plankton
Lifeform Extraction Tool brings together disparate European plankton
datasets into a central database from which it extracts abundance
time series of plankton functional groups, called “lifeforms”, according to
shared biological traits. This tool has been designed to make complex
plankton datasets accessible and meaningful for policy, public interest, and
scientific discovery. It allows examination of large-scale shifts in
lifeform abundance or distribution (for example, holoplankton being
partially replaced by meroplankton), providing clues to how the marine
environment is changing. The lifeform method enables datasets with different
plankton sampling and taxonomic analysis methodologies to be used together
to provide insights into the response to multiple stressors and robust
policy evidence for decision making. Lifeform time series generated with the
Plankton Lifeform Extraction Tool currently inform plankton and food web
indicators for the UK's Marine Strategy, the EU's Marine Strategy Framework
Directive, and for the Convention for the Protection of the Marine
Environment of the North-East Atlantic (OSPAR) biodiversity assessments.
The Plankton Lifeform Extraction Tool currently integrates 155 000 samples,
containing over 44 million plankton records, from nine different plankton
datasets within UK and European seas, collected between 1924 and 2017.
Additional datasets can be added, and time series can be updated. The Plankton
Lifeform Extraction Tool is hosted by The Archive for Marine Species and
Habitats Data (DASSH) at https://www.dassh.ac.uk/lifeforms/ (last access: 22 November 2021, Ostle et al., 2021). The lifeform outputs are linked to specific, DOI-ed, versions of the
Plankton Lifeform Traits Master List and each underlying dataset.
Funder
European Commission Scottish Government European Maritime and Fisheries Fund Department for Environment, Food and Rural Affairs, UK Government Natural Environment Research Council National Science Foundation
Publisher
Copernicus GmbH
Subject
General Earth and Planetary Sciences
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